KEGG   Vitis vinifera (wine grape): 100251277
Entry
100251277         CDS       T01084                                 
Name
(RefSeq) vacuolar sorting protein 3
  KO
K20177  vacuolar protein sorting-associated protein 3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100251277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100251277
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    100251277
SSDB
Motif
Pfam: zf-Vps39_C Clathrin Vps39_1 CNH TPR_Vps41
Other DBs
NCBI-GeneID: 100251277
NCBI-ProteinID: XP_002270724
UniProt: E0CT98
LinkDB
Position
10:join(18911879..18913024,18921274..18921549,18923132..18923328,18923563..18923704,18924395..18924667,18924768..18924840,18928947..18928995,18934566..18934854,18935094..18935149,18935757..18935825,18935946..18936057,18937132..18937221,18939065..18939235,18939598..18939690)
AA seq 1011 aa
MAKLHPSSRTVLELLADFEPAKPVGIRSIATFTSSDSETLVYIGTQSGSLILLSLNSNFP
SLSHSSNASTANAAKNVPSHLRSVSVCDSPVDSIHVVADIGRVLVLSDGFMFLMDSLLIQ
PVKRLSFLKGVAVISRRLRTGDAESLDFSENVSGLVESSSASQRFLMKLGSGIRANGAKA
RESEHLRDGNRVFAIAAAKKLVLVELLLVNRLGRSDREIDSAGGGASFVILKEIQGVDGV
RTMVWIDDSIIIGTSSGYSLISCVSGQCSVLFSLPDPTSMPHLKLLRKEHKVLLLVDNVG
IIVNAYGQPVGGSLVFRHFPDSVGEISSYVVVASDGKMELYHKKSGVCIQMASVAAEGSG
MSVVADAEDASGNLVVVATPSKVICYRKVPSEEQIKDLLRKKNFKEAITLVEELESEGEM
TKEMLSFVHAQVGFLLLFDLHFEEAVDHFLQSETMQPSEIFPFIMRDPNRWSLLVPRNRY
WGLHPPPAPLEDVVDDGLKAIQRAIFLRKAGVETPVDDDFLLNPPSRADLLESAIKNIIR
YLQVSRRRDLTLSVREGVDTLLMYLYRALNSVDDMEKLASSENSCIVEELETLLDESGHL
RTLAFLYASKGMSSKALAIWRILARNYSSGLWKDPAVESELLDTNASTLSGKEAVAIEAT
KILEESSDQDLVLQHLGWIADVCQVLAVRVLTSERRADQLSPDEVIAAIDPKKVEILQRY
LQWLIEDQDSNDTQFHTLYALSLAKSAIEAFETESSFQNPDAGRLEETCSAGSERNSIFQ
SPVRERLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSE
AAEQYCAEIGRPDAYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDM
PLQLASDTILRMLRARLHHHRQGQIVHNLSRAVDVDARLARLEERTRHVQINDESLCDSC
HARLGTKLFAMYPDDSIVCYKCFRRQGESTSVTGVDFKRDILFKPGWLVTR
NT seq 3036 nt   +upstreamnt  +downstreamnt
atggccaagcttcacccttcaagccggacagtccttgaactgctcgccgatttcgaaccc
gcgaagccggttggaatccgatctatcgccaccttcacttcctccgattccgaaacccta
gtttacatcggaacccagtccggttccctaatcctcctctctctcaactccaatttcccc
tcactttcacacagttcaaacgcctcaacggccaacgctgccaaaaatgttccctctcat
ttgcggagcgtttcggtgtgtgattcaccggtggattccattcacgttgtggccgacatc
gggagggttctggtgctttctgatgggttcatgttcttgatggattcgcttttgattcag
ccagtgaagaggctgagttttctcaagggggtggccgtgatttcccggaggttgcggacc
ggcgatgctgaaagtttagatttttcggagaatgtttcgggtttggtggagtcttcgagt
gcgagtcagcggtttctgatgaaattgggtagtgggattagggccaacggtgcgaaagct
cgggaatctgagcacttgcgggacggtaatcgcgtgtttgccatagctgctgctaagaaa
ttggtattggtagagcttcttttggtcaatagattaggtaggagtgatagggagattgat
agtgctggtgggggtgcttcttttgtgattttgaaggaaattcagggtgttgatggggtc
aggaccatggtttggattgatgattcgataattataggtacttctagtggttacagtttg
atttcgtgtgtttcggggcagtgcagtgttctattctcgcttccggatccaactagtatg
cctcaccttaaattgttgaggaaagagcataaagtgcttctgttggttgacaatgtggga
ataattgttaatgcttatgggcaaccagttggtgggagcttggtgtttcgccattttccg
gattctgtgggggagatatcttcatatgtagtagttgctagtgatgggaagatggaattg
tatcacaagaagtcgggtgtttgtattcaaatggcttcagtagctgcagaaggatctggt
atgtctgttgttgcggatgcagaagatgcaagtgggaatcttgttgtagttgcaactcca
tccaaggttatttgctaccgtaaagtgccttcagaagaacaaattaaagaccttttgaga
aagaagaacttcaaggaagccatcaccttagtggaggagcttgaatctgaaggtgaaatg
acgaaggagatgctttcatttgttcatgctcaagtggggttcctcttgctctttgatttg
cattttgaggaagcagtggatcactttttgcagtcagaaacaatgcagccttctgaaata
tttccattcataatgcgagacccaaaccgctggtctcttttggttccccggaatcggtat
tggggtttgcatcctccccctgcacctcttgaagacgttgtggatgatggattgaaggct
atccaaagagctatttttcttagaaaagcaggtgtagaaaccccagtagatgatgatttt
cttttgaatccaccaagtagagctgatctattggaatcagctatcaaaaacattatcagg
tatctacaggtttcacgcaggagggacttgactttgtcagtgagggagggagttgataca
cttttgatgtacctctatagagccctaaatagtgtggatgacatggagaagttggcatct
tctgaaaacagttgtattgtggaggagttagaaactttattggatgaatctggacatttg
cggacacttgccttcctgtatgcaagtaaaggaatgagctcaaaggctcttgctatttgg
cgtattctagccagaaattattcatctggcctctggaaagatcctgcagtggagagtgag
cttctggatacaaatgcaagtactctctctggcaaggaggctgttgcaattgaggccaca
aagatccttgaagagtcatctgatcaagatttggtcctgcaacatcttggatggattgcg
gatgtctgccaggtactcgcagttcgagttttaacatcagagagaagagctgatcaactt
tcgcctgatgaagtaattgctgcaattgatccaaaaaaggttgaaattcttcagaggtat
ctccagtggttgattgaagatcaagattctaatgacacacagttccatacgttatatgct
ctctcacttgccaaatcagctattgaagctttcgaaacagaaagcagctttcagaaccct
gatgctggaagattagaggagacgtgttctgctggttctgaaaggaattcaatttttcag
agtcctgtcagagaaaggttgcagatctttttacagtcttcagacttgtatgatcctgaa
gaggtccttgacttgattgaaggatctgagttatggctggaaaaggctattctgtacagg
aaactagggcaggaaacattggtgctccaaattttggccttgaagctggaagacagtgaa
gctgctgaacaatattgtgcagagattggtagaccagatgcctatatgcagttgcttgat
atgtatttggatccccaagatggtaaggagcctatgtttaaggctgcagttcgccttctc
cacaatcatggtgaatcactggaccccctgcaggttttagagacattatctccagatatg
cctctccaacttgcttcagatactatattaagaatgttgagagctcggctccatcatcat
cgtcaaggacagattgtgcataacctatcccgtgctgtagacgttgatgcaagattagca
agattggaagaaagaacaaggcatgtgcagatcaatgatgagagcttatgtgattcttgt
catgctcgccttggaacaaagctatttgcaatgtatccagacgatagtattgtctgttac
aagtgtttccgtcgtcaaggtgaatccacttctgtcacaggtgttgacttcaaacgagat
atcttatttaaaccaggttggcttgtgacccgataa

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