Vitis vinifera (wine grape): 100251284
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Entry
100251284 CDS
T01084
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100251284
04121 Ubiquitin system [BR:
vvi04121
]
100251284
Enzymes [BR:
vvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100251284
Membrane trafficking [BR:
vvi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100251284
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100251284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
CxC4
zf-Nse
Rad50_zn_hook
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
100251284
NCBI-ProteinID:
XP_002266870
UniProt:
F6HAD8
A0ABY9C3I3
LinkDB
All DBs
Position
6:complement(17766510..17767520)
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AA seq
336 aa
AA seq
DB search
MSTGGNTHWCYQCRRRVRLQGRDTVCSYCYGGFIQELNDLEGLVPEAFLGSQNSEDNHGQ
MSSIFDAFNGLVRQGNADQRFGLVNAVNDFMRQRMAGRNPNFDVRVRSGLVPEDNSMSGY
RSGPWLVFHGQIPVEALFSGGTGRGGNVGDLFLGPGLEELIEQLTMNDRRGPPPATRSSI
DAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCDHIYHSDCIVPWLVQHNSCPVCR
QELPPQVSGNVRGQQSSNGGNRSSRSENRSSSNGSSASGSENGGQSQGRRNLFSSLWPFG
SSNPNAHHYDETGGSSSRTPHGENHEMDYSGWPSDY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactggtggaaacacacactggtgttatcaatgcaggcggagggttcgtcttcaa
ggacgggacacggtttgctcttattgctatggaggctttatacaagagctcaatgacctg
gaaggtttagtaccagaagctttcttggggtctcagaactcagaagataaccatggccag
atgtcttcaatttttgatgcttttaatggtctcgtgagacagggcaatgctgaccaaaga
tttggacttgtgaatgctgtcaatgattttatgaggcagagaatggcaggacgaaacccg
aactttgatgttagagtgagatctggtttggttcctgaagacaacagcatgagtggctat
cgttcaggtccttggttggtattccatggccagatccccgttgaagcccttttcagtggt
ggtacaggcaggggaggtaatgttggtgacttgtttttgggccctggactggaagaactg
attgaacaacttaccatgaatgataggaggggtcctcccccggcaactcgttcttccatt
gatgctatgcccactattaagatcacgcagaggcatcttcgctctgactcacactgccct
gtttgtaaagataagtttgagttgggttctgaagcaaggcagatgccatgtgaccatata
tatcactcagactgtattgttccttggttggttcagcacaactcatgccctgtttgtcgc
caggagctgcctccacaagtttctggtaatgttcgtggtcaacaaagttcaaatggtgga
aacaggagcagcaggagtgagaacaggagcagcagcaatggcagtagtgccagtggcagc
gagaatggtgggcagagtcagggaaggaggaacctgttctcgtctttgtggccttttggc
tcgtcaaacccaaatgctcatcattatgatgaaacaggaggaagcagctcaagaaccccc
catggagagaatcatgagatggattactctggatggccttctgattactga
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