Vitis vinifera (wine grape): 100251625
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Entry
100251625 CDS
T01084
Name
(RefSeq) syntaxin-132 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100251625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100251625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vvi04147
]
100251625
Membrane trafficking [BR:
vvi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
100251625
Exosome [BR:
vvi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100251625
Exosomal proteins of other body fluids (saliva and urine)
100251625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF2383
Syntaxin_2
Ead_Ea22
Motif
Other DBs
NCBI-GeneID:
100251625
NCBI-ProteinID:
XP_002273906
LinkDB
All DBs
Position
12:join(7172277..7172423,7173108..7173221,7173296..7173352,7173789..7173837,7174083..7174171,7174282..7174355,7174463..7174505,7174584..7174644,7174774..7174799,7174884..7174961,7175051..7175131,7175206..7175271,7175387..7175545)
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AA seq
347 aa
AA seq
DB search
MAGHHSNINISKLFPISHNPLVVSLLGSLSCSFFPKPLCNFIKMNDLLTDSFVGDAKVQP
PKERDIEMGTRVLRTNSDLGLEAFNKQIQEVEKQVDKLTFLLKKLKDANEESKSVTKASA
MKEIKKRLEKDVDEVGKIAQNVKAKLEAINRDNLANRKKPGCEKGTGVDRSRKNMTNALT
KKFKDLMIDFQALRQKMQDEYREVVERRVMTVTGTRPDEETIDNLIETGNSEQIFQKAIQ
EMGRGQVLATLEEIQERHDTVKEIEKKLLDLHQIYLDMAVLVEAQGDLLNNIENQVTNAV
DHVQWGTDALRTAKSLQKKSRKCMMFAIILILIIAAIITLSVLKPWK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggccggccatcatagtaacatcaacatatcaaaactgttcccaatatcacataatcct
ctcgtcgtctcccttttaggctctctttcttgttctttcttccctaaacctctctgtaat
ttcatcaagatgaacgacctgctcacggattcatttgttggagatgccaaagttcagcct
cccaaagaaagagacatcgaaatgggaacccgggttctgaggactaactcagatttggga
ttggaagctttcaataagcagatacaagaggttgagaagcaggtggataagctcacattc
ttactcaagaaacttaaggatgctaacgaggagtcgaagtctgttaccaaagcgtctgcc
atgaaagaaatcaagaagcggttggagaaagatgttgatgaagtgggaaagatagcacaa
aatgtcaaagcaaaactagaagcaataaacagagataacttagccaatcgaaaaaagcct
ggctgtgaaaagggaacaggtgttgatcgatcaaggaaaaacatgacaaatgcattgaca
aagaagttcaaggacctaatgatagactttcaggccctcagacaaaagatgcaagatgag
taccgcgaggttgtggagagaagggtcatgacagttactggaaccagaccagatgaagag
acaatagacaacctgatagaaactggaaacagcgagcaaatcttccagaaggcaattcaa
gagatgggtagaggacaggtgctggccacactggaagaaattcaggaaagacatgacact
gtgaaggaaattgagaagaagctccttgacttgcatcagatttaccttgatatggctgtt
ctagtggaagcccaaggagacctgttaaataacattgaaaaccaggtgacaaatgcagtg
gaccatgtgcaatggggaacagatgctctcagaacagcaaagagcttgcaaaagaagtca
agaaaatgcatgatgtttgccatcatcctcatcttgattattgcagccattatcactctt
tctgtcctgaaaccttggaaatag
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