Vitis vinifera (wine grape): 100251674
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Entry
100251674 CDS
T01084
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100251674
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100251674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
100251674
NCBI-ProteinID:
XP_010651514
LinkDB
All DBs
Position
6:complement(join(19752395..19752741,19752831..19753733,19754394..19754421))
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AA seq
425 aa
AA seq
DB search
MMMMMMREKESAVVATTRRLPSDSGAFADWVASSSTGRAADDLSLGFNAGPAAAGNASSA
SGGGMWSSSSRQINYGLPHEMGMVGLRDVFVVAPASSFHHNNQHDPIISDPHAINGSNAA
TALGVGVGVGVIPLLTAAPCLAPSSMGGVDEADMLGHRSKGGGIQFWQNQQTQHANYLKK
PMILDHNSSSNLLSCGVGGVGASGPTTAGGTTCQDCGNQAKKDCSHRRCRTCCKSRGFDC
ATHVKSTWVPAARRRERQLMVSVTPGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTPP
RSFDTSSSHQDASFKEALPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFL
YDQGLETRDGFPNISELHLGGGSGSGGGGGARNGGTSSPILDPPDIYAASGGGLLGGSSY
GNAIN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgagagagaaagaatcagcagttgtggctactacaaggagactg
ccttcagattctggcgcttttgctgactgggtcgcttcttcttccaccggccgtgccgcc
gatgacctctctctgggattcaatgctggcccagccgccgctggaaacgcctcctctgcc
agcggcggtggaatgtggtcttcctcctctcgccagatcaattacggcctcccacatgag
atgggcatggtgggtcttcgcgacgtcttcgtcgtcgctccggcctcctccttccaccac
aacaaccagcacgaccccatcatctccgatcctcacgccatcaatggctcgaatgcagcc
accgctcttggtgttggggtcggcgtcggtgtcatccccctcctcactgccgctccttgc
ctcgctccgtcgagcatgggtggcgtcgacgaagcagatatgctaggccatcgaagcaaa
ggcggtggaatacagttctggcaaaaccagcaaacccagcacgccaattatctcaagaaa
cccatgattctcgatcacaatagctcttccaatttgctcagctgtggcgttggtggagtc
ggtgcttcgggtcctacaaccgcgggtgggacgacgtgccaggactgtggaaatcaagcc
aagaaagactgcagtcatcgccggtgcagaacttgctgcaaaagccgtggttttgattgc
gctactcacgtcaagagcacatgggttccggccgctaggaggcgagagcgacagctcatg
gtctccgtcactcccggagcaggctcttcagggtccacctccggtgctaagaaacctagg
ctcatcacttcacaaactactacaacatctcatacttccacttccaatacaactcctcca
agaagctttgatactagttcgagtcatcaagatgcgagttttaaagaggcattgccgggg
caagtccgagccccggccgtgttcaagtgtgttagagtgactgcggtggatgatggcgaa
gacgaatatgcttaccaggcagtggtgaagattggtgggcatgtgttcaaagggtttcta
tacgatcaagggttggaaacaagagatgggtttcccaatatctcagagctgcatttgggt
ggtggtagtggtagtggtggcggtggtggggctaggaatggggggacttcctccccaatt
ctcgaccctcctgatatctatgcggcttcgggaggaggcctgcttggaggttcaagctac
ggtaacgcaataaattga
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