KEGG   Vitis vinifera (wine grape): 100251846
Entry
100251846         CDS       T01084                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100251846
Enzymes [BR:vvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     100251846
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    100251846
SSDB
Motif
Pfam: Sec63 DEAD SNRNP200_wHTH DExH14_plug ResIII Helicase_C DEXQc_Suv3 AAA_19 T2SSE
Other DBs
NCBI-GeneID: 100251846
NCBI-ProteinID: XP_002284129
LinkDB
Position
17:complement(join(8444577..8444666,8445535..8445669,8445734..8445883,8447818..8447988,8450196..8450363,8450480..8450575,8462264..8462326,8462426..8462591,8462689..8462756,8462977..8463120,8463230..8463385,8464430..8464495,8464612..8464803,8464892..8465041,8468561..8468651,8471115..8471203,8471995..8472057,8472177..8472302,8472379..8472468,8474496..8474618,8474729..8474845,8474958..8475161,8481669..8481749,8481865..8481945,8482044..8482145,8482244..8482468,8482559..8482714,8483740..8483952,8484335..8484484,8485454..8485576,8485680..8485745,8487057..8487122,8487208..8487339,8487428..8487502,8492381..8492464,8492546..8492698,8492813..8492878,8494332..8494493,8494589..8494705,8494781..8494852,8495773..8495832,8495911..8496027,8496701..8497003,8497805..8497909,8498311..8498376,8498489..8498939,8499574..8499742,8500485..8500546,8500818..8500924))
AA seq 2093 aa
MLVQLPRLTNSLRDPFDVDHAYLQRKLILQNHNPRSDANSVEESELARKIVHGWDEASIE
VCQAYKHFIAAVVELIDGEVASEYFREVALLVYNLFTGPRDEYEDDTRIAEKKLELQKLL
GYVVSDANLQKVASLAQRLFNLQPNNLVTGLVHERQVHGSSDDVEFGANLAFQAPSRFLV
DASLEDEEFLGEESAPPSAGRDRWYDHTASTHDHSAVDRRNFTLRWLRDACDGIVRGSTS
QLSQDELAMAICRVLDSDKPGEEIAGDLLDLVGDNAFEMVQDIISHRKDLTDAIHHGLLV
LKSEKAASNSQSRMPSYGTQVTVQTESERQIDKLRRKEEKRHRRGSEYGVGDNLLAANFS
SLLEASENKSPFDGLIGSGEGPHSLPVTALPQGTLRKHYKGYEEVIVPPTPTAQLKPGEK
LIDIKELDDFAQAAFHGYKSLNRIQSRIFQTVYYTNENVLVCAPTGAGKTNIAMIAILHE
IGQHFKDGYLHKNEFKIVYVAPMKALAAEVTSTFSHRLSPLNISVRELTGDMQLSKYELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVES
TQTMIRIVGLSATLPNYLEVAQFLRVNPEAGLFYFDSSYRPVPLAQQYIGISEQNFLART
ELLNEICYNKVVDSLRQGHQAMVFVHSRKDTAKTAEKLIELARRNDDVELFKNETHPQFS
LVKMEVMKSRNKDLVEYFGSGVGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVN
LPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYL
RLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGW
DEVIADPSLSLKQRAFVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVET
YNEMLRRHMNDSEVIDMVAHSSEFENIVVREEEQNELEMLARTSCPLEIKGGPSNKHGKI
SILIQLYISRGSIDSFSLISDAAYISASLARIMRALFEICLRRGWCEMCSFMLDYCKAVD
RQVWPHQHPLRQFDKDLSSDILRKLEDRGADLDRLYDMQEKDIGALIRYASGGKLVKQYL
GYFPSIQLSATVSPITRTVLKIDLLIASDFVWKDRFHGAAQRWWILVEDSDNDHIYHSEN
FTLTKRMARGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLQAEAFYTISFHNLALPEARTS
HTELLDLKPLPVTSLGNRTYELLYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTIS
AELAMLHLFNTQPDMKVIYIAPLKAIVRERMIDWKKRIVSQLGKEMVEMTGDYTPDLMAL
MSADIIISTPEKWDGISRNWHNRGYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISS
QTERTVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRM
NSMNKPAYAAICTHSPMKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSMPEEALQM
VLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAH
LVIIKGTEFYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLY
EPFPVESSLREHFHDHINAEIVSGTICHKEDAMHYLTWTYLFRRLMVNPAYYGLDDTDPE
ILSSYLSRLVQNTFEDLEDSGCIQMNEDNVEPMMLGSIASQYYLSYMTVSMFGSNIGPDT
SLEVFLHILSGASEYDELPVRHNEENYNEALSAKVPCMVDKNRLDDPHVKANLLFQAHFS
QLELPISDYVTDLKSVLDQSIRIVQAMIDICANSGWLSSTITCMHLLQMIMQGLWFSETS
CLWMLPCMTNELEGSLTRRGISKVQQLLDLPKATLQALINNFPASRLYQDLQYFPHVRVI
LKLQRKDANGGKSPTLNIRLERMNSKRKSLRAFAPRFPKVKNEAWWLVLGNTSTSELFAL
KRVSFADRLVTHMKLPSSTPTNLQGMKLILVSDCYIGFEQEHSIEELDGSQQL
NT seq 6282 nt   +upstreamnt  +downstreamnt
atgttggttcagcttcctcgcttaacgaactctctccgagaccccttcgatgtcgaccat
gcctatctccaacgcaaactcatcctccaaaaccacaaccctcgcagtgatgccaattcg
gttgaggaatcagagcttgcacggaagatagttcatgggtgggacgaagcttccattgaa
gtgtgtcaagcatataaacactttattgctgcagtggttgagttgatagatggtgaagtg
gcctcagaatatttccgtgaggtagcgttattggtttataatctttttacaggccccaga
gatgagtatgaagatgatacgaggattgccgagaaaaagttggaattgcaaaaacttctt
ggttatgtggtctcagatgctaatctgcagaaagttgcctctctagcacagaggcttttc
aatttgcagcctaacaaccttgtgactggacttgttcatgaaaggcaagtacatgggagc
agtgatgatgtggaatttggtgctaaccttgctttccaagcaccttctcggtttttggtg
gatgcatctttggaagatgaggaatttttgggggaggaaagtgctccaccttctgcagga
cgtgatagatggtatgatcatactgcctctacacatgatcattctgctgttgaccggcgg
aacttcactttgagatggttaagagatgcttgtgatggaatagtcagaggcagtacttca
cagctttcccaagatgaattagcaatggccatttgccgggtgcttgattcggacaaacct
ggtgaggagatagctggtgacttgttggatcttgtcggggataatgcatttgaaatggtt
caagatattatatcgcatcgaaaggaccttactgatgctatacatcatggcttgctggtg
ctgaaatctgaaaaagcagcttcgaattcacaatcacgtatgcctagttatggcactcag
gttaccgttcaaacagagtctgagcggcagattgataaacttcggcgcaaagaggaaaaa
cgacatagacgtggaagtgaatatggggttggagacaatttgttggctgcaaatttttct
tctttacttgaagctagtgaaaacaagagtccatttgatggtctaattgggagtggagaa
ggcccacactcattaccagttactgcccttcctcaaggaactctcaggaagcattacaag
ggttatgaagaagtcatagtcccaccaactccaacagcacaattgaaacctggagaaaaa
ctgattgatataaaggagttagatgactttgctcaagctgctttccatggctacaaatca
cttaaccgtatccagagccggattttccaaactgtttattacactaatgagaatgtactg
gtttgtgctccaacaggagctggcaaaacgaatatagctatgattgctattctacatgag
attggccagcacttcaaggatggctacttgcataaaaatgaatttaagatagtttatgtt
gctccaatgaaggcattagctgcagaggtcacatcaacatttagtcatcgtttatctcca
ttgaatatatccgtaagagaacttactggagacatgcaactttctaagtatgagcttgaa
gaaactcagatgatagtgaccacacctgagaaatgggatgtcattactcgtaagagcagt
gacatgtcactctcgatgctcgtaaagctcttaattattgatgaagtgcatcttttgaat
gatgatagaggggcggtaatagaggcattagttgctcggacccttcgacaggttgagtca
acacagaccatgatacgtatcgttggcctttcggccactctacccaattatttggaggtt
gctcagtttctgagggtgaatcctgaggcaggactattctactttgattctagctatcga
ccagtgcctcttgcacaacagtatattggaattagtgagcagaactttcttgctcgcact
gaacttttaaatgagatatgctataataaggttgttgattcattgaggcaagggcatcaa
gcaatggtttttgttcattcacgaaaagacactgcaaaaactgctgagaaactgattgag
cttgcgcgaaggaatgatgatgtagagctttttaagaatgaaacacatccacagttttcc
ttagtcaagatggaagtcatgaaatccagaaacaaagatttggttgaatattttgggtct
ggggttggtattcaccatgctggtatgttacgtgctgatagaggtctaactgagcggctt
ttctctgatggccttttgaaggttcttgtttgcacagcaactttggcatggggagtaaat
ctacctgctcatactgttgtgattaaggggactcaattatatgatccaaaggcaggtgga
tggcgagatctgggcatgcttgatgtgatgcagatctttggacgtgctggaagacctcag
tttgacaaaagtggtgaaggcatcataataacatctcatgaaaaactagcctactatcta
cggttactgacaagtcaactacccatagaaagtcagtttattagctccttgaaagataat
ttgaatgcagaagtggcattgggtactgttacaaatgttaaggaagcttgtgcatggctt
gggtatacatacctttttataaggatgaggctgaatcctttggcatatggcattggatgg
gatgaggtcattgcagatccttctttgagtttaaagcagagagcttttgtaacagatgct
gcacgtgcactagacaaagcaaaaatgatgcggtttgatgagaaaagtgggaacttttac
tgtacagagcttggtcgaattgctagccacttttatattcaatactccagtgttgaaact
tacaatgaaatgttgaggcgccacatgaatgacagtgaggtaattgacatggtagcccat
tcttctgagtttgaaaacattgttgttcgagaggaggaacaaaatgagctagaaatgttg
gcacgtacatcatgccccttagaaattaagggtggtccttcaaataaacatggaaaaatt
tcaattcttattcagttgtacatatctcggggttcaatagatagtttttcattgatttct
gatgctgcatacataagcgcaagtttggctcgcatcatgcgagcgttatttgaaatttgt
ttgcgcagagggtggtgtgagatgtgttccttcatgttggattactgcaaggctgtggat
cgccaagtttggccacatcaacatcccctcagacaatttgacaaggatctttcatcagac
atactgcggaagcttgaagatcgtggggctgacttagatcgcctctacgatatgcaggaa
aaagacattggtgccctgattcgttatgcatctggtggaaagttggttaagcaatactta
ggatatttcccatcaatccagttgtccgcaactgtaagtccaatcaccagaactgttttg
aagattgatctgctcatagcttcagacttcgtatggaaggatcgttttcatggtgcagca
caacgttggtggatcctggttgaggactctgacaatgaccacatctaccactctgagaat
ttcacactgacaaagcggatggcaagaggggagcctcagaagctttcgttcactgtgcca
atatttgaaccacatccacctcaatactacattcgtgctgtttctgattcttggttgcag
gcagaggccttctacactatatctttccataatctagcactgccagaggctcgtacttcc
cacacagaacttctagatttgaaacctcttcctgtgacttcacttggcaacagaacgtat
gaactcttgtacaaattttcacacttcaatcccattcaaacacagacttttcatgtcctg
tatcacacagacaacaatgtcctcttaggagctcctactggaagtggaaaaacgatatct
gctgagcttgctatgcttcatctcttcaacactcagcctgatatgaaggttatttacata
gcacctctgaaggctattgttcgggaaagaatgattgattggaaaaagcgtattgtctct
caacttggaaaagagatggttgagatgactggggattatactccagacttgatggccctc
atgtcagcagatatcataatttctacgcccgaaaaatgggacggtatcagtcgtaactgg
cataatcgaggctatgttaaaaaggtcgggcttatgattttggatgagatccacttactt
ggagctgatcgtggacccattcttgaggttattgtttcaaggatgagatacatatcatca
caaacagagaggacagtgcggtttgtaggactttcaactgctttagcaaatgcaggtgac
ttggctgactggttgggtgttggtgaaattggactcttcaatttcaagcctagtgtgagg
cctgtccctcttgaagttcatatccagggataccctggtaaattttactgcccaaggatg
aatagcatgaataaaccagcatatgctgccatttgcacccattctcctatgaaaccagtt
cttatatttgtttcatctcgtcgccagacaaggcttactgcactagatcttattcagttt
gcagcttcggatgaacacccaaggcaatttctgagcatgccagaagaagcactacagatg
gttctttctcaggttactgatcagaacctaaggcacaccttgcaatttggcattgggcta
caccatgcaggattaaatgacaaagacagatctctggttgaggagcttttttcaaacaac
aagattcaggtcttggtttgtactagcacactagcctggggtgtaaaccttccagctcat
ctagttataatcaagggaacagagttttatgacggaaaggccaaaagatatgttgacttt
cctatcacagatatcttgcaaatgatggggcgtgcaggccgaccacaatatgaccaacat
gggaaagcagtcattcttgttcatgaacctaaaaagagcttttataaaaagttcctttat
gaaccatttccagttgagagtagtctgagggagcactttcatgatcacatcaatgcagag
atagtttctggaacaatttgtcataaagaggacgccatgcattatctcacctggacttat
ttatttcgcagactaatggttaacccagcttattatggcttagatgatacagaccctgag
attctaagttcatacttgtcacggttagtgcaaaacactttcgaggatctggaagacagt
ggatgcatccagatgaatgaagataatgtcgagcctatgatgttaggttcaatagcatct
cagtattaccttagctacatgactgtgtcaatgtttggttctaacataggccctgataca
tcacttgaagttttccttcatattctatctggtgcttctgagtatgatgagcttcctgtg
cggcataatgaggaaaattacaatgaagcactatctgcgaaagttccatgtatggtggat
aagaatcgcctagatgacccacatgtcaaagcaaatttgctatttcaggcacatttttct
cagctagagttgcccatcagtgactatgtcacagacttgaagtcagtattggatcaaagt
atacgtattgtgcaggcaatgatagatatatgtgctaacagtggatggctttcaagcaca
attacttgtatgcatctcttgcaaatgatcatgcagggtttatggtttagtgagacttct
tgcctatggatgttgccctgcatgactaatgaacttgagggttcactgaccagaagagga
atctcaaaagtgcagcaactgttagatcttcccaaggcaactttgcaggctttgattaat
aatttccctgcttcaagattatatcaggatctgcagtatttcccccatgttcgtgtgata
ttaaagcttcagagaaaggacgctaatggtggaaagtctcccactctgaatattagattg
gaaagaatgaattccaagcggaaatccttgagagcttttgcccctcgattcccaaaggtc
aaaaacgaagcttggtggctggttcttggtaacacctcaacctccgaactctttgctctg
aagagagttagttttgctgaccgcttagtcacccacatgaagttaccatcatcaactcca
accaatctccagggaatgaagctgattttagtttcagattgttatattgggtttgaacaa
gagcactccatcgaagaacttgatggatctcagcaactgtaa

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