KEGG   Vitis vinifera (wine grape): 100251847
Entry
100251847         CDS       T01084                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
  KO
K20299  vacuolar protein sorting-associated protein 53
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100251847
Membrane trafficking [BR:vvi04131]
 Protein recycling
  Others
   EARP complex
    100251847
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    100251847
SSDB
Motif
Pfam: Vps53_N VPS53_C RINT1_TIP1 COG4_N COG7 Vps54_N DUF401 MPH2 LXG
Other DBs
NCBI-GeneID: 100251847
NCBI-ProteinID: XP_002271570
UniProt: D7T427
LinkDB
Position
9:complement(join(20104830..20105138,20105637..20105732,20105820..20105888,20109256..20109318,20112595..20112672,20113032..20113125,20113210..20113343,20113422..20113499,20117469..20117534,20117653..20117760,20118268..20118345,20118530..20118589,20118735..20118839,20119556..20119597,20119710..20119895,20127067..20127130,20127699..20127840,20127947..20128107,20138060..20138184,20139198..20139268,20141678..20141828,20142023..20142079,20145196..20145290,20145819..20145867))
AA seq 826 aa
MDKSSALEYINQMFPTEASLSGVEPLMQKIHSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATHAVEELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQQLSDACLVVDALEPSVREDLVKNFCSRELTSYRQIFEGAELAK
LDKAERRYAWIKRRLRTNEEIWKIFPPSWHVAYLLCIQFCKMTRTQLVEILDNLKEKPDV
GTLLLALQRTLEFEEELAEKFGGDTRRKDIGNDIEEVDRGENKSQTVSDIRKKYEKKLAA
NQGSGTEEKDGNKDLSVPGAGFNFRGIISSCFEPHLTVYVELEEKTLMENLEKLVQEETW
DIEEGSQTNVLSSSVQVFLIIRRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFARLP
KGGTGIVAAATGMDGQIKTSDRDERVICYIVNTAEYCHKTSGELAENVSKIIDSQLSDAV
DMSEVQDEFSAVITKALITLVHGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNAINLIL
TSSIPALGSLLSPIYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKTIL
LEIPSLGRQTSGAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRI
LELKGLKKADQQSILDDFNKRGSGITQPSITATPVVQATPTAPVAPAALTVANPASVGVI
ASREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggacaagtccagcgctttggaatacatcaaccagatgttccctacagaggcatcttta
tctggtgttgagccacttatgcaaaagatacatagtgagattcgtcgtgtggatgctgga
atattagcagctgttcgccaacagagtaattcaggaaccaaagcaaaggaagatcttgct
gctgcaacgcatgctgtggaggagctcatgtataagattcgagaaattaaaactaaagct
gagcaaagtgaaacaatggttcaggaaatatgtcgtgacattaagaagctggattttgca
aaaaagcatataacaactacaattactgctcttcatcgtcttaccatgttagtgtctgct
gttgagcaacttcaagtaatggcttcaaaacgacaatataaggaagcagctgctcagcta
gaggctgtaaaccaattgtgtagccactttgaagcctatagggatgttccaaagatcaca
gagctgagggagaaattcaagaacataaaacaaatacttaagtctcatgtattctctgat
ttttctagcttaggtactgggaaagagacagaagaaacaaatttactccagcagttatct
gatgcttgcttagttgttgatgctttggaaccatctgtgagggaagatttggtaaagaat
ttttgcagcagggagcttacttcataccggcagatctttgaaggagctgaactggcaaag
ttggataaagctgaacggaggtatgcatggatcaaacgtcgattaagaacaaatgaggag
atctggaaaatttttcctccttcatggcatgttgcttatttgctctgtatccagttctgt
aagatgacaaggactcaacttgtggagatccttgataatttaaaagagaagccagatgtt
ggcacattattgttggcgctacagagaactctggaatttgaggaagaattagcagagaaa
tttgggggagacactcgaagaaaggacattggtaatgatattgaagaagttgatagaggg
gaaaataaaagtcaaactgtatcagatatccgaaagaagtatgagaaaaagcttgcagca
aatcaaggaagcgggactgaagaaaaggatggaaataaggatttatccgtgcctggagct
gggtttaacttccgtggaattatttcgtcttgctttgaacctcacttgacagtatatgta
gagctagaagagaagacactaatggagaatttggagaaacttgtccaggaggaaacatgg
gatatcgaggagggaagccagaccaatgtcttatccagtagtgtacaggtttttctcata
attagaagaagtttaaagaggtgcagtgctttgacaaagaaccagacgttatttaatttg
tttaaggttttccaaagaattctcaaagcgtatgcaacaaagctttttgcaagattacct
aaaggtggtacaggcattgttgcagcggccacgggtatggacggacagataaagacatct
gacagggatgaaagagtgatttgttatattgttaataccgctgagtactgccataaaacg
tctggtgaattggctgaaaatgtatctaaaataattgattcccaattatcagatgcagtg
gatatgtcagaagtacaggatgaattctctgcggttataacaaaagcattgataaccctg
gtgcatggtttggaaacaaaatttgatgctgagatggctgcaatgacacgtgtaccatgg
ggtacgcttgaaagtgttggtgaccaatcagagtatgttaatgccattaatttgatcctt
actagtagtattcctgcacttgggagccttctttcaccaatttacttccagttcttctta
gacaagcttgcatcatctcttggtccacgcttctacctcaacattttcaaatgcaagcaa
atatcagaaactggagcccaacaaatgttgttggatactcaagcagtaaagacaattctt
cttgagattccttctcttgggcgacagacgtcaggagctgctagctactcaaaatttgta
agccgtgagatgagcaaagctgaagcactcttgaaggttatattgtctccagttgattca
gtggccaatacatatcgtgcgttgttgccagagggaacacccttggagtttcagcggatt
ctggagcttaagggccttaaaaaagccgaccagcaaagtatactggacgacttcaataag
cgtggatcagggattacacaaccttccattactgctacaccagtagtccaggctaccccc
actgcgcctgttgctcctgctgctctcacagttgcaaatcccgcttcagttggagttatt
gcttctcgagaggatgtgctaaccagagctgctgcacttggacgaggtgcagccaccact
ggattcaagaggttccttgcactgacagaagctgcaaaagaccggaaggatggtcctttt
aggaagctcttcaatgcatga

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