KEGG   Vitis vinifera (wine grape): 100251875
Entry
100251875         CDS       T01084                                 
Name
(RefSeq) nuclear-pore anchor isoform X1
  KO
K09291  nucleoprotein TPR
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100251875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100251875
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100251875
SSDB
Motif
Pfam: TPR_MLP1_2 Actino_peptide
Other DBs
NCBI-GeneID: 100251875
NCBI-ProteinID: XP_010645082
UniProt: D7T103
LinkDB
Position
19:join(26892278..26892583,26892667..26892813,26894266..26894364,26903435..26903563,26903699..26903791,26903889..26903954,26922464..26922553,26922662..26922739,26923424..26923536,26924872..26924992,26925107..26925199,26926921..26926969,26927993..26928096,26928174..26928242,26931109..26931252,26931360..26931464,26931598..26931711,26931821..26931899,26939023..26939066,26940198..26940271,26942205..26942307,26942635..26942769,26942868..26942966,26943037..26943078,26943181..26943234,26944192..26944371,26944517..26944564,26945018..26945068,26949877..26949960,26950032..26950106,26950197..26950381,26950487..26950589,26952416..26952532,26955523..26955615,26956755..26956910,26957032..26957085,26957699..26957812,26959374..26959451,26959551..26959700,26959782..26959853,26961691..26961846,26961953..26962006,26962185..26962272,26962358..26962440,26962521..26962649,26963096..26963200,26963843..26964023,26964157..26965517)
AA seq 2088 aa
MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAEQTCSLLEQKY
ISLSQEFSKLESQNAQLNSSLQERLSELAQIQAEKHQLHLKSIEKDGEIERLSTEESELH
KSKRQLLEFLEHKDLEISEKNATIKSYLDKIVNMTDTAALREARLSDAEAELSRSKAACA
RLLQEKELIERHNVWLNDELTSKVKSLTELRRTHVELEADMSTKHSDVERRLNECSSSLK
WNKERVKELEMKLTSMQQELCSSKDAAAANEQRLSAEIMTVNKLVELYKESSEEWSRKAG
ELEGVIKALETHLIQVENDYKERLEKEVFARKELEKEAADLKGKLEKCEAEMETSRRANE
LNLLPLSSLITGTTWLDSFQTNDMVEDNCMLVPKIPAGVSGTALAASLLRDGWSLAKMYS
KYQEAVDALRHEQLGRKHSEAMLEQVLHEIEEKAVVILDERAEHERMVEGYSAINQKLQQ
SLSEQSNLDKTIQELKADLRQQGRDYAVAQKEIVDLEKQVTVLLKECRDIQLRCGLVGHD
FADNGTITAADEMNAESNSDEVISERLLTFRDINGLVEQNVQLRSLVRSLSDQLEDKDME
LKEKFELELKKHTDQAASKVAAVLERAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSFPH
SAEAAPENGRKDLMLLLEGSQEATKKAQEQAAERVRSLQEDLAKSRSEIISLRSERDKFA
LEANFARERLESFMKEFEHQRDEANGILARNVEFSQLIVNYQRKIRESSESLHTVEELSR
KLTMEVSFLKHEKEMLSNSEKRASDEVRSLSERVHRLQATLDTIHSTEEFREEARTVERR
KQEEHIRQIEREWAEAKKELQEERDNVRTLTLDREQTIKNAMRQVEEMGKELAKALQAVA
AAEARAAVAEARYSDLEKKLKSSETKVVEINGECGPSSSSAHEAVVDLHIEKEEIEKLKE
EAQANKAHMLQYKSIAEVNEAALKQMEYAHENFRIEADKLKKSLEAEVMSLRERVSELEN
EAILKSKEAASTAAGNEEALASALAEIGSLKEENSIKMSQIAAIEIQISALKDDLENEHR
RWRSAQDNYERQVILQSETIQELTKTSQALALLQKEASELRKLADAKNAENNELKGKWEV
EKSMLEVAKNEAEKKYDEINEQNKILHSRLEALHIKLAEKDRRSVGISSSSGLDPLGDAG
LQNVINYLRRSKEIAETEISLLKQEKLRLQSQLESALKATETAQASLHAERANSRTLLFT
EEEIKSLQLQVREMNLLRESNMQIREENKHNFEECQKLREVAQKARIETENLEVLLRESQ
TEVETCKKEIEMQRTEKDQLEKRVGELLEQSKNIDVEDYERMKHDFHQMQINLREKDAQI
EEMKRHVSEKQDRISKLEQDIANSRLELSERENKINDILQAEANMKAELEKQKKVTAQLK
KRLEALSREKEELSKENQALSKQLEDYKQGKRSIGDVSGEQAMKEKEKEKEKDSRLQTLE
KALERQREEYRKERDDHRMEKAKRLKTEKTIVDSIKNVNQEKAKLVDELEKHKLALKRVS
DELEKLKHAKGNLPEGTSVVQLLSGPLLDDLAAAYALTVENFEKLAHSVFSELGARALPL
DPSSTVDTSSSAATTGLTAPAQPPSILTPVVPATSYSPAKAAEEREKRLAILKTNAETRK
TGRKLVRPRLVKSEEPQGDVDMAEIEGPNNGGKPAPSQDTETQTLPPVRKRLASSSTSDL
QEDTQIQGETTSDVAPPVLKRSRGSDSPQEAAEGQAAASLENLETLRAIEESFDAIADLP
QGSNEEAIDVEKEEAEISEGQTEEPKEPAQVDGTSEVELPNERASAVEEVLVKPIEREVV
FDDGPKDQAEQDIQPSMIELGSEKEEGELDPDVTDIEGGGDMCNITGGTTIGEGQPETVV
VPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDKSNDGNEQIAV
ETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQER
ARQRAMLRQAGVLSPSVGRGRGRAITRGRGVRGGRGRAGRGQSSGDQG
NT seq 6267 nt   +upstreamnt  +downstreamnt
atgccgctcttcatttccgacgaagagtactcccggtgctcaaacgacgtcgctttggtc
gccgagaaggcggattccttcatcagagacctctacaacgagctccagaccgtcaaagct
caggccgatgccgcctccatcaccgccgagcagacttgctctcttcttgagcagaagtac
atctctctctcccaagaattctccaaactcgaatctcaaaacgcccaactcaactcctct
cttcaagaacgactctcagagctcgcccaaatccaagctgaaaagcaccagctccacctc
aaatccattgagaaagatggagagattgagcggttgtctactgaggagtcggagcttcat
aaatcgaaaaggcagttgcttgagtttttggagcacaaggatttggagattagtgagaaa
aatgctacaatcaaaagttacttggataagattgttaacatgacagacactgctgctcta
agggaggctcgactgagtgatgccgaggcagagttgtcacgttctaaggctgcatgtgca
cgtcttttacaggagaaagaacttattgaaaggcataatgtttggcttaatgacgagtta
acatctaaagttaagagtctcactgagctacgaagaacacatgttgaacttgaggcagac
atgtctactaagcattcagatgttgagagacgattgaatgaatgctctagctctttgaaa
tggaataaagaaagagtgaaagagctagaaatgaagttgacatcaatgcaacaggagttg
tgctcatcaaaagatgctgctgcagccaatgaacagaggctttctgctgaaatcatgact
gtaaacaaacttgttgaactgtacaaagagagttcagaggaatggtccagaaaggcagga
gagcttgagggtgtgatcaaagctttggaaacacatttgattcaagttgaaaatgactat
aaagagagacttgaaaaggaagtatttgccagaaaggaactcgaaaaggaggcagcagat
ttgaaagggaaactcgaaaagtgtgaggctgagatggaaactagtagaagagcaaatgag
ctaaatcttcttccactcagcagtttaattactggaaccacatggttggattcttttcaa
accaatgacatggttgaagataactgcatgcttgtccccaagattccagcgggtgtttca
gggactgcattagcagcttcgcttctgcgcgatggctggagtctggctaagatgtatagc
aaatatcaagaggctgttgatgccttgcgacatgagcaattaggaaggaagcactctgaa
gcaatgttggaacaggtcctgcatgaaatagaggagaaagctgtagtcattttggatgag
agagcggaacatgagagaatggttgaaggatactctgcaatcaaccaaaaactgcagcaa
tctctttctgagcagtcgaatttggacaaaacaatccaggaacttaaggctgacttgagg
cagcaaggacgtgactacgctgtggctcagaaagagattgttgacctggagaaacaggtg
acggtgcttttaaaggaatgccgagatatacagcttcgttgtggattggtgggtcatgat
ttcgctgataacggtacaattactgctgctgatgagatgaatgcagagtctaattctgac
gaagtaatttcagaacggcttttgacttttagggatataaatggattagttgagcagaat
gtccagctccgaagccttgtacgcagcctttctgaccaacttgaggataaagatatggag
ttgaaggagaagtttgaactggagctcaaaaagcatactgatcaggctgcctctaaagtt
gcagcagtgttagaaagagctgaagagcaagggcgcatgattgaatcacttcacacctct
gttgcaatgtacaaacggttgtatgaggaggaacataaacttcattcatctttcccccat
tctgcagaagcagctccagaaaatggaaggaaggacctcatgcttcttcttgaaggttct
caggaagctacgaaaaaggcccaagaacaagctgctgaacgtgtcagatctcttcaagag
gatttggcgaagtctaggagtgagatcatatcattgcgatcagagcgtgacaaatttgct
ttggaagcaaattttgcacgagagagacttgaaagctttatgaaagaatttgaacatcag
agagatgaagctaatggcatcctagcaagaaatgtggaattctctcagctaatagttaat
taccaacgaaagatacgtgaaagttctgaatctttgcataccgtcgaggaactttctcga
aagctaactatggaggtgtcttttttgaagcatgaaaaagaaatgttgtcaaattctgaa
aaaagagcttctgatgaagttcgtagtttgtctgagagggtccaccgtctgcaggcgact
ttggacactatccatagcactgaggaatttcgtgaggaggctagaactgtggagaggaga
aaacaagaggagcatataagacagattgagagggaatgggctgaggcaaagaaagagcta
caagaagaacgtgataatgttcggacgctcacacttgacagggaacagactataaaaaat
gccatgagacaagttgaagaaatgggaaaagaacttgctaaggccttgcaagcggttgca
gctgctgaggctagggctgctgttgcagaggctcgatactctgatctggagaaaaagttg
aaatcttctgaaaccaaggttgttgagattaatggtgaatgtggaccctcctcgtcctca
gctcatgaggctgttgtggacttgcatattgagaaagaagagatagaaaaattgaaggaa
gaagcacaggctaacaaagctcatatgctacagtataaaagcatagcagaggtgaatgaa
gctgcactgaaacagatggaatatgctcatgaaaacttcaggattgaggcagataagcta
aagaaatcactggaagcagaggttatgtcacttagagagagggtttctgaacttgaaaat
gaagctattttgaagtccaaagaagcagcatctacagctgcaggaaatgaagaggctctt
gcttctgctttagctgaaattggtagtctaaaggaagaaaattcaatcaaaatgtcccaa
attgcggcgattgaaattcaaatttctgctttgaaagatgatttggagaacgagcatcga
cgttggcgttctgcacaagacaattatgaaagacaggtcatcctacaatcagagacaatt
caggagttgacaaaaacatcacaagctttggctttgctgcagaaggaggcttctgaattg
cgtaaactggcagatgcaaaaaatgctgaaaataacgaattaaaggggaagtgggaagtg
gagaagtcaatgttagaggtggcaaagaatgaagctgaaaagaaatatgatgagattaac
gaacagaacaagatcctacatagtcggctagaggctttgcacatcaaattggctgaaaag
gaccgcagatctgttggaatatcctcgagtagtggtttggatccacttggtgatgctgga
ttacagaatgtgattaattatctacgtcgctcgaaggaaatagcagaaacagagatctct
ttgttgaaacaggaaaagttgcgattacaatcccaacttgagagtgctttaaaggcaaca
gagacagcccaagcatcacttcatgctgagcgtgcaaattcaagaacattgttgttcaca
gaagaagagatcaaatccctacaacttcaggttagagaaatgaacttgcttcgggaaagc
aacatgcaaatcagagaggagaacaagcataattttgaggagtgccagaaattacgtgaa
gtagctcaaaaagctaggattgagactgagaatttggaggttctactgagggagagtcaa
actgaagtggaaacttgtaagaaagaaattgaaatgcaaaggacggaaaaagatcaattg
gaaaagagggttggtgagttgcttgagcagtccaaaaatattgatgtggaagattatgag
cgcatgaaacatgattttcatcagatgcagataaatctaagagagaaggatgctcaaata
gaggaaatgaagagacatgtatctgagaagcaggatagaatctcaaagttggaacaagac
attgcgaacagcaggttggaactaagtgagagggagaacaagataaatgatattttgcaa
gctgaggccaatatgaaagcagagttagagaagcaaaagaaggtgacagctcaattaaag
aagaggttggaggccttgtcaagggaaaaggaggaactgagcaaagagaatcaagctctt
tccaaacagttggaggattacaaacaagggaaaaggtccattggggatgtttcaggtgaa
caggccatgaaagagaaggagaaggagaaggaaaaagattccaggctacagactctggag
aaagctctcgagaggcagagggaggagtataggaaggagagggatgaccatcgaatggag
aaagcaaagcgcctgaagactgagaagacaatcgtggattctattaagaatgttaatcag
gagaaagcaaagctggtagatgaacttgagaaacataagctggctcttaagagggtctca
gacgaactcgaaaaactcaagcatgccaaaggcaatctacctgagggtacctcagtggtt
cagcttctttctgggcctctcttggatgatcttgctgctgcctatgcactgactgtagaa
aattttgagaagttggcacattcagtttttagtgagcttggagctcgtgctctgccgcta
gatccttcttcaactgttgatacttcttcttcagcagctactactggtttaacagctcct
gcccaacctccaagtatcttgactccagtggttcctgcaaccagctattcaccagccaaa
gctgccgaagaaagagagaagagattggctattcttaaaaccaatgctgaaacgcgtaaa
actggaaggaagttggttcggcctcgtcttgtgaaaagtgaggagccccaaggtgatgta
gatatggctgagattgaggggcctaacaatggagggaaacctgcaccttctcaggacaca
gaaactcaaactctacccccagttcgcaaacgtttagcttcttcatccacttctgattta
caagaagatactcagattcaaggggagactacctcagatgtggcaccacctgtgctaaag
agatccagaggctcagattccccacaagaggctgctgaaggacaggctgctgcttctttg
gaaaatcttgaaactcttcgggccatcgaagaatcttttgatgccattgctgatttacct
caaggctccaatgaggaagccatcgatgttgagaaagaagaggcagagatttctgaagga
caaactgaggagccaaaggaaccagcacaagtagatggcacgagtgaagttgaattgccg
aatgagagagccagtgctgtggaagaggttttggttaagccaattgaaagagaagtggtg
tttgatgatggaccaaaggatcaggctgagcaagacattcaaccatcaatgatagaattg
ggaagtgaaaaggaagagggagagctggacccagatgttacggatattgagggtggtggt
gacatgtgtaatataacagggggcacaacaataggtgagggtcagcctgagactgtggta
gttcctgtgacttcaccagctgggggtgatgaggaaggtctagtcactgcagcagtggac
attggtgatattaattcccctgagattctaaatgatgaaaaaacagccgaaggtgatgta
atggaagaggttgctgagggttctgataagtcgaatgatggtaatgagcagatagccgtg
gagactgaccaaactcctgaagctgctatgggttctgaaagtacttcgactagtactagt
actgttgtagatgttggtgtttcaaaacaaggtagccccaccgtaccagcagatccagaa
gaggtaaaacaggcattgcctgttggtagcagctcaactaccataaatttacaggagagg
gctagacagagagcaatgcttagacaggctggagttctttctccttcagttggtagaggc
cgtggaagggcaataactcgtggtcgaggtgtgcggggtggacggggacgtgctggacgt
ggacaatcatctggtgatcaaggttaa

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