Vitis vinifera (wine grape): 100251887
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Entry
100251887 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100251887
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100251887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100251887
Spliceosome [BR:
vvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100251887
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100251887
NCBI-ProteinID:
XP_059596028
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Position
10:complement(join(2153867..2153960,2154050..2154221,2154974..2155145,2156478..2156684,2156779..2156946,2157026..2157211,2157339..2157423,2158476..2158720,2158865..2159230))
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AA seq
564 aa
AA seq
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MKTKREDNSDEDEGREFPDLKRQKKLDESSPPPASLAFENALHTLASYDDDDDEKEEEEM
KEASGLRGREDNRRAERNGHRDGEEYDDDDDDDPHQEANQVKRSRLVEVRRDCPYLDTVN
RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKV
YCLPDGYEINDPSLDDIRHVLNPRFTREQVDQLDKNKQWSRALDGSDYLPGMVGLNNIKE
TDFVNVTIQSLMRVTPLRNFFLIPENYRHCKSPLVHRFGELTRKIWHARNFKGQVSPHEF
LQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHGDLRTSKKNSSIIYNCFQGELEVVKEIP
NKGFFEKRENGDDQNKATTADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKNIIPQV
PLFNILKKFDGELVTEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFIEKNPTLVNFP
VKNLELKDYIPLPAPKENEKLRSKYDLIANIVHDGKPGEGFYRVFVQRKSEELWYEMQDL
HVSETLPQMVALSETYMQIYEQQQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaagagagaagacaacagtgatgaggatgaaggaagggagtttcctgatttg
aagaggcagaagaagcttgatgagtcttctccaccacctgcttcccttgcttttgaaaat
gccctacatacccttgcttcttatgatgatgatgacgacgagaaagaagaagaggaaatg
aaggaagcaagtggtcttcgtggtagagaagataatagaagggctgaacggaatggtcat
agagatggagaagagtatgatgatgatgatgatgatgatcctcatcaagaggccaaccaa
gtgaagcgaagccgcttggttgaagttcgaagagactgcccttatcttgatactgttaac
cgccaggttttggattttgattttgagaagttttgctccgtgtctctttcaaacttaaat
gtatatgcatgtctggtctgtggaaagtattatcaaggaagaggacaaaaatctcatgca
tatactcatagtcttgaagcaggacaccatgtctacatcaatcttcgaaccgagaaagtt
tattgtcttcctgatggatatgaaattaatgatccatctttggatgatattcgacatgtt
ctaaacccaagatttacaagggaacaagttgatcagcttgacaaaaacaaacaatggtca
agagcacttgatggatctgattacctgcctgggatggtgggattgaataatattaaagag
actgattttgtaaatgtcacaattcagtctttaatgcgggtcactcccttgaggaacttt
ttccttatacctgaaaactatcgacactgtaaatctccacttgttcaccgatttggagaa
cttacacgaaagatctggcatgcacggaactttaagggacaggtgagtccacatgagttt
ctacaggcagttatgaaagctagtaagaaacggtttcgaataggtgcacagtctgaccca
gttgaatttatgtcatggcttcttaatacacttcatggagatctaagaacttcgaagaaa
aatagcagcatcatctacaattgctttcagggtgaattggaagttgtgaaggagatccct
aacaaaggtttctttgagaaaagggaaaatggtgatgaccagaataaggccactactgca
gatgaacatgctgatgttatcttggaaacttgtagaatgccgttcttaatgcttggattg
gacttgccaccaccacctctttttaaagatgtgatggagaaaaatatcataccgcaggtt
ccacttttcaacatcctaaagaagtttgatggtgagcttgtcacagaagttgtccggcct
cgaatagcaaggatgagatatcgtgttacccgattgcctcagtatctaattctccacatg
cgtagatttactaagaacaatttctttatcgagaagaaccctactcttgtcaattttcct
gtgaagaacttagagctgaaggattatatccccctacctgcacctaaagagaatgagaaa
ctgcgttcaaagtatgatttgattgcaaatattgttcatgatggaaagcctggtgaaggg
ttctacagggtatttgtacagcggaagtcagaagaactatggtacgagatgcaggatttg
catgtctcagaaactcttccacaaatggttgctctctctgagacctacatgcagatctac
gagcagcaacaatga
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