Vitis vinifera (wine grape): 100251921
Help
Entry
100251921 CDS
T01084
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32
KO
K12896
serine/arginine-rich splicing factor 7
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100251921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100251921
Spliceosome [BR:
vvi03041
]
Common components
Common spliceosomal components
SR proteins
100251921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
100251921
NCBI-ProteinID:
XP_002281756
LinkDB
All DBs
Position
13:complement(join(1996173..1996551,1996674..1996769,1996875..1997071,1997840..1997935,1998096..1998135,1998849..1998955))
Genome browser
AA seq
304 aa
AA seq
DB search
MPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA
RYSLNGRDFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPKKLKRGRSYSRSPSPRRGRSRSRSRSRSYSRSRSYSQ
PRSSPKRERSAERLERRSRSPHDSRSPKRRKASPPPSKGRKRSPTPDERSPKERSPSPRD
RKQTTNGSDYSDSPRVKSRSPALDAERDSPRDRNYRRSPDEENGHSRSPSPIPRDDASPV
DDDE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtatgatgaccgccatgggagtacccgtctttatgttggtcgtttgtcttct
cggacaaggtcgcgtgatctggaggacctatttagtagatatggaagagtacgcgatgtg
gacatgaagcacgactttgcctttgttgaattcagtgatccacgagatgccgatgatgca
aggtatagcttgaatggtcgagatttcgatggaagtcgtataatagtagaatttgctaag
gggggtccacgcggtcctggtgggtctcgtgagtatcttggcagaggtcctccacctgga
tcaggtcgctgctttaactgtggaattgatggccattgggctcgagattgtaaagctggt
gattggaagaacaagtgttaccgctgtggggaacggggccatatagaaagaaattgtcag
aatagtccgaagaagctaaagcgtggacgtagttattctcggtctccatctcctcgtcgt
ggtcggagccggagccgaagcagaagtcgtagttacagcaggagccgcagttacagtcaa
cccagatcatctcctaagagggagcgaagtgctgagcgtctggagagaagatctaggagc
cctcatgacagcaggagccctaagcggcgcaaggcatcaccaccaccatcaaagggaagg
aaacgcagtccaacacctgatgagaggagcccaaaagagagaagcccctccccaagggat
cgtaagcagaccaccaatggttcagactacagtgacagccccagggtgaagagcagaagc
cctgcacttgatgctgagagagacagcccaagagataggaattacaggaggagccctgat
gaagaaaatggccacagtcgcagccctagtcccattcctagggacgatgcaagtcctgtt
gatgatgatgagtaa
DBGET
integrated database retrieval system
