Vitis vinifera (wine grape): 100252021
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Entry
100252021 CDS
T01084
Name
(RefSeq) F-box protein At5g07670
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100252021
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100252021
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
LRR_9
F-box
Motif
Other DBs
NCBI-GeneID:
100252021
NCBI-ProteinID:
XP_002263969
UniProt:
F6I2U9
A0A438FHP3
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Position
16:join(8699314..8700482,8701108..8701375)
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AA seq
478 aa
AA seq
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MSYSYSSEKQNPYLPLKKSPSSWSNLWFKSPNKALNHVVFTMHLKSLTKHQLQPHKALIF
DRTLLLSDELLLRVFQKLPESQRKPNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSR
FPNLTRVDLVHACIVWPRSCGVLLNHRVVSVPVDSEVSQNGFLENGKVLASNVVDRGLRF
LASGYPNLRKLAVVGASELGLLSVAEECSTLQELELHKCSDATLRAISGFGNLQILKLIG
NAEGLYKSLVSDVGLTILAQGCTRLVKLELSGCEGSYDGIKAIGQCCQMLEELTLSDHRL
DGGWLSALSYCENLKTLRFQSCRRIDVCPGLDEYLGSCPTLERLHLHKCQLRDKLSMRAL
YMISGAVRDFVIQDCWGLDNDILGLATTCRRVKLLSLEGCSLLTTEGLESAVLSWKDLQK
LRVVSCKNIKDSEVSPALSTLFSILKELQWRPDTRSLLSSSLVESGMGKRGSKFFRKI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtactcgtactcatcagagaagcaaaacccttatctgccgttgaagaagtctccg
tcaagttggtcaaatctctggttcaagtcacccaacaaagccctaaaccatgtggttttc
accatgcacctcaagtctctcaccaaacaccaacttcaacctcacaaagcccttatcttc
gatcgaacgctgctcctgtccgatgagcttctgctacgggtcttccagaaactccctgaa
tcgcagaggaagcccaactcccttgtttgcaagcgttggttgagtcttcagggtcgactc
gttcaatccgtgaagcttctggaatgggactttcttgaatcaggtagactcgtttcgaga
tttccgaatctcacccgtgttgatttggttcacgcctgcattgtctggcctcgaagttgt
ggcgttttgttgaatcacagagttgtttcagttcctgtagattccgaagtttcacaaaac
gggtttcttgagaatggaaaagtgttagcttctaatgttgttgacagaggtttgagattt
cttgccagtgggtatcctaatttgcgtaaactcgcggttgtaggggcaagtgagttgggt
ttattgagtgtggctgaggagtgttctacactgcaagaattggagttacataagtgtagt
gatgccacattgagggcgatttccgggtttgggaatttgcagatcttgaaattgattgga
aatgctgaagggctttacaagtctttggtctcggatgttggattgacgattttggcacaa
gggtgtacgaggttggtgaagcttgagcttagtgggtgtgaggggagctatgatgggatc
aaggcaattgggcagtgctgccaaatgctcgaagaactgactctgtctgatcataggctc
gatggtggatggctgtcagctctatcttattgtgagaatttgaagactttgaggtttcag
tcatgtagaaggatcgatgtctgtccagggcttgatgagtatttgggttcttgtccaact
cttgagcgattacatttgcacaagtgtcaattgcgggataaattgagtatgagagcattg
tatatgatttctggggcagtgagagactttgttattcaggattgttggggacttgacaat
gatattttgggcttagcaactacttgcaggagggtaaagttgttgtctttagaaggatgc
tcattgctaacaacagaaggtctggagtctgccgtgctttcctggaaagatcttcaaaag
ctgagagtagtatcatgtaagaatatcaaggacagtgaagtctcccccgcactttcaacc
ttattctcgattctgaaggagttacaatggaggcctgatacaaggtctctcctctcatcg
agccttgtggagagtggcatgggcaaaagaggcagtaaatttttcaggaagatatga
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