KEGG T01084: 100252167

Vitis vinifera (wine grape): 100252167

Entry

100252167         CDS       T01084

Name

(RefSeq) double-strand break repair protein MRE11 isoform X2

K10865

double-strand break repair protein MRE11

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi03440

Homologous recombination

vvi03450

Non-homologous end-joining

Brite

KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100252167
   03450 Non-homologous end-joining
    100252167
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100252167
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100252167
DNA replication proteins [BR:vvi03032]
Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    100252167
DNA repair and recombination proteins [BR:vvi03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     100252167
    BRCA1-C complex
     100252167
   NHEJ (non-homologous end-joining)
    MRX complex
     100252167

SSDB

Motif

Pfam:

Mre11_DNA_bind Metallophos

Other DBs

NCBI-GeneID:

100252167

NCBI-ProteinID:

XP_002281726

UniProt:

E0CST0 A0ABY9DYD6

LinkDB

Position

19:complement(join(3811575..3811607,3812357..3812551,3813086..3813206,3814723..3814991,3815130..3815201,3815874..3815951,3816165..3816278,3816593..3816675,3817797..3817857,3817942..3818004,3823021..3823098,3823247..3823318,3823388..3823450,3823558..3823665,3823756..3823858,3824283..3824374,3824465..3824533,3824616..3824735,3826673..3826763,3827258..3827415,3827935..3828070,3828318..3828334))

AA seq 731 aa
MGDSSREDASNTLRVLVATDCHLGYMEKDEVRRHDSFQAFEEICSIADQKQVDFLLLGGD
LFHENKPSRSTLVKTIEILRRYTLNDRPVQFEVVSDQTVNFANIFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLYPILIRKGSTLVA
LYGLGNIRDERLNRMFQTPHAVQWMQPEAQEGCQVSDWFNILVLHQNRVKTNPKNAISEH
FLPRFLDFIVWGHEHECLVDPQEVAGMGFHITQPGSSIATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLKSVRPFEYTEIVLKDEADIDPNDQTSILEHLDKVVRNLIDKASGKFVNGSE
LKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFTKASRKGRSEAKIDDSERLR
PEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLEETRSKIA
RDSDPLKFEEEDLILKVGECLEERVKERSVHSKETPQFMSSARSLENIRSKGTAETGSAV
SFSDDEDPTQLSGSKSATRGRKGSSATFKSSHDASEQGKGKSSTRGRGRGRGRGRSSSTL
KQMTLDSSLGFRHSERSASVAATAAVRNLADDEDNVESSSSDEAGKYGINEVDDSSENDE
NLQGKGRKRAAPRGRGRGATTSSKRGRKSDSTSIQRMLMNKDDDDDDEDDMSKRLNKPQP
RVTRNYGALRR

NT seq 2196 nt +upstreamnt +downstreamnt
atgggtgattcttcgagggaggatgccagcaatactcttagagtgcttgttgctacggat
tgccatctaggctatatggagaaggatgaagtacgtaggcatgattctttccaggcattt
gaggaaatatgctcaatagcagatcaaaagcaggtggacttcttactccttggtggtgat
cttttccatgagaataagccctcaaggtcaacattggttaagaccattgagatcctccgt
cgttataccctcaatgatcgtccggtgcagtttgaagttgtcagtgatcagactgtgaac
ttcgcaaacatatttggtcatgtgaattatgaagatcctcacttcaatgtcggcttgcca
gtttttagtattcatggaaatcatgatgatcctgctggagtggacaacctttctgctgtt
gatattctttcggcatgcaatctggtgaactattttgggaaaatggttcttggaggttct
ggtgttggtcaaatcactctctaccctattcttattaggaagggttcaacgcttgtggct
ctctatggtcttgggaatattcgagatgaacgcctcaataggatgtttcagacaccacat
gctgtgcaatggatgcagcccgaagctcaagaagggtgtcaagtgtcagactggttcaac
attttggtacttcatcaaaacagagtaaagacaaatcctaaaaatgcaatcagtgagcat
tttttaccaaggttcctagacttcatagtgtgggggcatgaacatgaatgtcttgttgat
cctcaggaggttgcaggtatgggtttccacattacccaaccaggctcttccattgcaaca
tcactgattgatggagagtcaaagccgaagcatgtactacttttagaaattaagggaaat
caataccgcccaaccaagatcccattgaagtcagtgaggccttttgaatacactgagatt
gtgctaaaggatgaagctgacattgatccaaatgatcaaacttcaattcttgaacatcta
gacaaagtggtcagaaacctgattgacaaagctagtggaaagtttgttaatggatcagag
ctcaagcttccactagtccggataaaggtagattactctggatttatgacaataaatcct
caaaggtttgggcaaaagtatgtgggcaaggttgcaaatccccaagatattcttattttc
acaaaggcttcaagaaaaggtcgtagtgaagccaaaattgatgactctgagcggcttcgc
ccagaagaattgaatcaacaaaatatagaagccttagttgctgagaataatctgaaaatg
gagatccttccagtcaatgatttggatgttgcattgcacaattttgtcaacaaagatgac
aaaatggctttctattcttgtgttcaatataatctggaagagacacgtagtaaaattgct
cgtgattcagatcctttaaagtttgaagaggaagatttaattcttaaagttggagagtgc
ttggaggaacgggtcaaggaaaggtcagtgcactcaaaggaaaccccacagttcatgtca
agtgctcggtcattggagaatatcagaagtaaaggtactgctgaaactggaagtgcagtt
tcctttagtgatgatgaagaccccacccagttatctgggtcaaaatctgccactaggggc
agaaaagggtcatcagcaacctttaagtcctcccatgatgcttctgaacaaggtaaaggt
aaatcttctacaagaggaaggggcaggggcaggggcagggggaggagctccagtaccttg
aagcagatgacacttgattcaagtctgggattccgccattctgaaagatctgcatcagtt
gctgcgacagctgctgttcgaaaccttgctgatgatgaggacaatgtggagtccagttca
agcgatgaagcagggaaatatggaattaatgaggttgatgacagctcggaaaatgatgag
aatctccaaggcaaaggacgcaaaagagctgctccaaggggaaggggtagaggtgctact
acatcctctaagcgaggaaggaaatcagattccacttcaattcagagaatgcttatgaac
aaagatgatgatgatgatgatgaggatgacatgtcaaagagattaaataagcctcagcct
cgggtaacaaggaattatggtgctctaagaaggtaa

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