Vitis vinifera (wine grape): 100252276
Help
Entry
100252276 CDS
T01084
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00270
Cysteine and methionine metabolism
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
100252276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100252276
03032 DNA replication proteins [BR:
vvi03032
]
100252276
03036 Chromosome and associated proteins [BR:
vvi03036
]
100252276
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
vvi02048
]
100252276
Enzymes [BR:
vvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
100252276
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100252276
DNA replication proteins [BR:
vvi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
100252276
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100252276
Prokaryotic defense system [BR:
vvi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
100252276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
DUF5523
Motif
Other DBs
NCBI-GeneID:
100252276
NCBI-ProteinID:
XP_019079260
LinkDB
All DBs
Position
12:join(23907310..23909442,23909836..23910000,23910204..23910372,23910552..23910663,23910859..23911006,23911089..23911286,23911589..23911852,23911987..23912148,23912272..23912490,23914817..23914963)
Genome browser
AA seq
1238 aa
AA seq
DB search
MEKAKKGETMLAVFESDDAESSVGATTKPRQKRCSSDSSGSACGSRKKPKKASRHTDCKN
KSVCLLRKSSVNGTKKQPIEKDEQVAVMSTTGENIPRPNRRLTNFVFYDSDERPQPVEML
EICNMYIAGTILPLDESPDEEKEKGIRCEHFGRLESWAISGFEEGSPVIWVSTEIADYEC
IEPRNGYKRIYKNFYEKARACIEVYKKLSKSCGGNPNMSLDELVAGVVSSMAQGRKFLSG
LSIESFVISQGEFIHDQLIGLDETCKQNDHVFSELPVLAALRDKKGKSKGSLPGKAIASG
RVPKRSLRISDEEKKNETKRKVMSATTTKLINRTWGEYYSNYLPEKSEGGRGFQVNEDEE
TGNEDEETGNEDEETGNEDEEMGNENEEEEENMEVDSEVEEEETLLLEKIKKPHSALKPT
KFCSSNEEITWDGQLEDKTCAGETLYKRAIVRGDVVAVGSSVLVEMDDSDGVSPIYFVEY
MFENLDGRKMVHGRLMLRGFQTVLGSSANEREVFLTNDCMVFDLGDVKQTVIMEIRLIPW
GYQHRKANANNDKIDRARAEERRSKGLPLEYYCRSLYWPERGAFFRLPTSTMGLGSGVCQ
SCKIKETQKEKETFKVNKSKTTFTLKGTEYSVKDFVYLHPHYFAADGKAMDTSKSRKNAG
PKPFVVCHLLQIKLSKSFKLADPESTKLKVRRFFRPEDISAEKAHLSDIREVYYSTQIVV
VPVMAIEGKCEVRKKHELPAFNAPAEFQHIFFCQSQYDPDTRAIKKLPARLKLSSSENMD
TDEAACRKRTSECKGGECDKSRLATLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEA
FHLNHPDALMFINDCNVILRAIMSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVD
FINGGPPCQGFSGMNRFNQGKWSKMQCEMILAFLSFADYFRPRFFLLENVRNFVTFNKGQ
TFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFPGPE
LKINNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTMEYPREASSWYQRKFRGDM
SILTDHISKKMNELNLIRCKKIPKRPGADWHAIKNGKVRLSSGRIAKLLPSWLTNKGKRH
NQWKGVLGRLDWEGHFPTSITNPQPLGKVGMCFHPDQDRILSVRECARTQGFPDSYKFSG
QMHHKHRQVGNAVPPPLAFALGRKLKEAVERKHSTQSD
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggcaaaaaaaggtgaaacaatgcttgcagtttttgagtctgatgatgcagaa
tccagtgttggggcaaccaccaaaccaaggcagaagagatgcagctctgacagcagtgga
agtgcttgtggttctaggaagaagccaaagaaagcttccaggcacactgattgtaagaac
aaatctgtttgtttgttaagaaaatcttccgtaaatggaactaaaaagcagcccattgag
aaggatgagcaagtggctgtgatgtcaactactggggaaaatattcctaggccaaacagg
aggctcacgaactttgttttttatgattcagatgaacgaccacagccggttgaaatgtta
gaaatatgtaatatgtacattgcaggtacaatattgcctctggatgaaagtcctgatgag
gagaaggaaaagggtatcagatgtgaacattttgggaggctggaatcttgggcaatttcc
ggatttgaggaaggttcaccagttatttgggtctctactgaaattgcagactacgaatgc
attgagcctaggaatggctataaaagaatatataagaatttctatgagaaagcccgtgcc
tgtattgaagtctacaaaaaattgtcaaaatcttgtggaggaaatcccaatatgagcctt
gatgaactggtagctggagttgttagctccatggctcaaggtaggaaatttttgtcaggg
ttgtctattgaaagctttgttatctcacagggagagtttatccatgatcaactgataggt
ttagatgagacatgcaagcaaaacgatcacgtattcagtgagttgcctgtacttgctgct
ctccgggacaaaaagggaaagagtaagggttctttgcctgggaaggcaattgcatcaggt
agggtgccaaaacgaagccttagaattagtgatgaagagaagaaaaatgaaaccaaaagg
aaagtaatgtcagctacaacaacaaaactgatcaacagaacctggggagagtactactcc
aattacttgccagaaaaatcagaggggggacgtggttttcaagtgaatgaggatgaagaa
acagggaacgaggatgaagaaacggggaatgaggatgaagaaacagggaatgaggatgaa
gagatggggaatgagaatgaagaagaagaagaaaatatggaagtagattctgaagttgaa
gaggaggaaacgttgcttcttgagaaaattaagaaacctcattcagcattaaagccaaca
aaattttgttcttccaacgaagaaattacatgggatggacagctggaggacaaaacatgt
gcaggagagactctttacaaacgagctattgttcgtggagatgtggttgctgttggtagt
tctgtgctggtggaaatggatgactcagatggtgtttctcctatatattttgtggagtac
atgtttgagaatttagatgggagaaaaatggtccacggcagactgatgctgcgaggattt
cagacagttcttggcagcagtgctaatgagagagaggtatttctgaccaatgactgcatg
gtatttgatctgggtgatgttaaacaaacagtgatcatggaaatccggttgataccttgg
ggttatcagcatcggaaggctaatgcaaacaatgataagattgaccgggcaagggcagag
gagagaagaagcaaaggattgccattggaatattattgtagaagcttgtattggccagag
agaggtgctttttttcgtctcccaaccagtaccatgggccttggaagtggggtttgtcaa
tcttgtaaaatcaaggaaactcagaaggagaaagaaacctttaaagtgaacaagtccaag
acaacctttaccctcaaaggtactgagtattctgttaaagactttgtctacctccacccc
cattattttgcagctgatggcaaggccatggatacctcaaagagtaggaaaaatgcgggg
cccaaaccttttgttgtctgccatttactgcagatcaaattatccaagtccttcaagctg
gctgatcctgaatctaccaagcttaaagtcaggaggtttttcagaccagaggacatttca
gcagagaaggcacacctttctgatattcgagaggtttactacagtacacaaatagttgtg
gtacctgttatggctatagaaggaaaatgcgaagttagaaagaagcatgagcttccagct
tttaatgcccctgctgaatttcagcatattttcttctgtcaaagtcaatatgatcctgac
acaagagctattaaaaagttgccagctcgtctcaagttaagctcttcggaaaacatggac
actgatgaagcagcatgtaggaaaagaacaagtgaatgtaaaggaggagaatgtgataaa
agccgcctagccactctagatgtatttgctggttgtggtggcttatctgaaggcttacag
caagctggtgtttcgctgaccaagtgggcaattgaatatgaagagcctgcaggagaagca
tttcaccttaatcatccagatgcgctgatgttcatcaatgattgtaatgttatcttaaga
gctattatgtcagcttgtggagatgcagatgactgtgtttccacttctgaggccactgag
ttagctgaaaaacttgatgaaaaggacatacgtaatttgcctcggcctggacaagtggat
ttcatcaatggagggcctccttgtcagggtttctctggaatgaacaggtttaaccagggt
aagtggagtaagatgcaatgtgagatgatcttagcatttttatcctttgctgattacttt
cggccaaggtttttcctcctggagaacgtcagaaactttgtaacgttcaacaaagggcaa
acattccggttaaccctagcttcactcctggaaatgggttatcaggtgagattcggagtt
ctagaagctggagcttatggagtcccccaatctcgtcgacgagctttcatatgggcagca
tctcctgaggagacactccctgagtggcctgagccaatgcatgtttttccgggcccagaa
cttaaaatcaataactatgctgctgttcgcagtacagcaactggtgggccattccgtgca
ataactgtcagagacgcgattggggatctcccaaatattggcaatggggcttgtgaaaca
accatggagtacccaagagaagcttcatcttggtaccaaaggaagtttcgaggagatatg
tcaatcctaacagatcatatctccaagaaaatgaacgagctgaatctcatccgatgtaaa
aaaattccaaaacgaccaggagctgattggcacgcgatcaagaatggaaaggttcgtctg
tcctcagggcgcatagctaaacttctaccttcttggctgacaaacaaaggcaaaaggcat
aaccagtggaaaggagtacttggaaggctggactgggaaggacattttccaacctctatt
acaaaccctcaaccattgggtaaggttggaatgtgttttcacccagatcaggacaggatt
ctttcagttcgtgaatgtgctcgaactcaaggtttcccagactcttataaattctctgga
caaatgcaccacaagcatcggcaggttggaaatgctgtccctcctcctttggcatttgcg
ctggggagaaaactcaaggaagctgtagaaaggaaacattcaacacagtcggactga
DBGET
integrated database retrieval system
