KEGG   Vitis vinifera (wine grape): 100252341
Entry
100252341         CDS       T01084                                 
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03050  Proteasome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100252341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:vvi03051]
    100252341
Proteasome [BR:vvi03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     100252341
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_5 AAA_2 RuvB_N AAA_22 nSTAND3 PRS7_OB DUF815 Prot_ATP_ID_OB_N AAA_7 TIP49 Parvo_NS1 AAA_14 RNA_helicase IstB_IS21 AAA_33 Mg_chelatase AAA_18 Sigma54_activat AAA_3 AAA_28 TsaE AAA_24 AAA_lid_PRS2_C NPHP3_N NACHT bpMoxR ABC_tran ATPase AAA_30 AAA_11 Sec8_N ATPase_2 ResIII PhoH AAA_25
Other DBs
NCBI-GeneID: 100252341
NCBI-ProteinID: XP_002281107
UniProt: A5AEB9 A0A438K169
LinkDB
Position
18:complement(join(11118825..11118899,11119079..11119177,11119261..11119452,11120564..11120701,11120794..11120880,11120984..11121070,11121214..11121375,11121566..11121702,11122416..11122535,11122863..11122962))
AA seq 398 aa
MSDGEDAVRRRSVLADYRKKLLHHKELDSRVRSVRESLRGAKKEFNKTEDDLKSLQSVGQ
IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
RAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgagcgatggagaagacgcagtgcgtcgacgtagtgtgttggcggactaccgtaaaaag
ctcctccaccacaaagaactcgattctagagtccgatcagtgagggagagtttacgtggt
gctaagaaggagttcaacaaaacggaggatgatttgaagtctcttcagagtgttgggcag
atcattggagaagttctccggcctcttgacaatgaacgcttgattgtaaaagcaagtagt
ggacccaggtatgtagttggctgtcgcagtaaagtggataaggaaaaactgacttctgga
acaagagtggttcttgatatgacaacactcacaatcatgcgagctcttccacgtgaagtt
gatccagttgtttataacatgttgcacgaagatcctggtaatgtcagctactcagctgtg
ggtgggttatcagatcaaatccgagaactcagggaatcaattgagctacctctaatgaat
cctgaactctttcttagagttggaattaaacctcccaagggtgttcttctttatgggcct
cctggtactgggaagacattattagctagagcaattgccagtaatatagatgccaacttc
ttgaaggttgtttcaagtgcaataattgataaatacattggggaaagtgcaaggttaata
cgagaaatgtttggatatgcacgtgatcaccaaccctgcattatttttatggatgagatt
gatgccatcggtggacgccgtttcagtgagggaacaagtgctgaccgtgaaatacaaaga
acactgatggagttacttaatcagcttgatggatttgaccagcttgggaaggttaaaatg
attatggcaacaaaccggcctgatgttcttgaccctgcacttcttcgtcctgggcgatta
gacagaaagatagagattccattgccaaatgagcaatcaagaatggaaatccttaagatt
catgcggctgggattgccaagcatggcgagattgactatgaggctgttgtaaagcttgca
gagggatttaatggggctgatcttcgtaatgtttgcacggaggctggaatgtctgcaatt
cgtgcagaacgtgattatgtcatacatgaagatttcatgaaggctgttcggaaactgaat
gaagcaaagaaacttgaatctagtgctcactacaatgctgattttgggaaagactag

DBGET integrated database retrieval system