Vitis vinifera (wine grape): 100252370
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Entry
100252370 CDS
T01084
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvi03000
]
100252370
Transcription factors [BR:
vvi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100252370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
100252370
NCBI-ProteinID:
XP_002275400
UniProt:
A0ABY9CX09
LinkDB
All DBs
Position
12:join(3782838..3782949,3783129..3783525,3783969..3784824)
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AA seq
454 aa
AA seq
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MLQKMAAEAIPNGFIQNPIGGSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCE
ICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGI
KKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAF
CDALAEETARVTAASNINNGTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGL
SLWMGQGSQGHETMGTNLQEIHQLRSSMSPGSVYADPLVSCSNPPPSSYQLSWVFGSKQS
SNNTEDQLTSSTSLPLSNVKEAAGSQIVSVPSLYSSQHHSHQTPLGNMSATALLQKAAQM
GATSADPFLGSFGLKCDSSLVQDGNKFCGLYTANQLPTNDMENPKDLSTFNQLQMYPAKR
RNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagaagatggctgcagaagcaattccaaatggtttcattcaaaatccaattggt
ggatccaatcctcccaccatcaagaagaagagaaaccttccaggaaccccagatcctgaa
gccgaagtcatagccttgtcaccgaagacactcatggccacaaacagattcttatgtgag
atatgtggaaaaggttttcagagggatcaaaatctgcaactgcatcggcgaggacacaac
cttccttggaagctcaagcaaaggagcagcaaggaacccaggaagcgtgtctacgtctgt
cccgaaaagacctgtgtccaccaccacccttcgagggctctaggagacctgactgggata
aaaaagcacttctgtcggaagcacggggagaagaagtggaagtgcgagaagtgctcaaag
cgatacgccgtgcagtcagactggaaagctcacaccaaaacttgcggcactagggaatac
aaatgtgactgtggcactctattttcaaggcgagatagcttcatcactcatagggccttc
tgtgatgccctagcagaagagacggctagagttactgctgcctccaacatcaacaatggc
actatcaattatcatttcatggggacttcacttgcaccaagcatgccacaacatttctcc
tctatcttcaagcctatctcaagcaacgacgaagcaaccgatcaaacaagacggggactc
tccctgtggatgggccaaggatctcaaggccatgaaacaatggggacgaatctccaagag
attcatcaactcagatcctcaatgagtccaggttcggtgtatgctgacccacttgtttct
tgttcaaatcctccaccatcaagctatcaattgagttgggtgtttggaagcaaacagtct
tcaaataacacggaagatcaactaacaagcagtacttcacttccattaagcaatgttaag
gaagctgcaggaagtcagattgtgagtgtcccttccttgtacagctcccaacaccactcc
catcaaacacctctaggaaacatgtctgcgacagccttattgcagaaagctgcccaaatg
ggagcaacttctgctgatcctttccttgggagctttgggttgaagtgtgacagtagtcta
gttcaagatggaaacaaattttgtgggttgtatactgcaaaccaacttccaaccaacgac
atggagaatccgaaggatctctccactttcaatcagttgcaaatgtaccccgcaaaacgc
cgcaacacccagaacgatgacagcactgggggccaaactagagatttcttaggtgttggg
gtgcaaaccatctgccacccatcttcaatcaatggatggatgtga
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