Vitis vinifera (wine grape): 100252451
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Entry
100252451 CDS
T01084
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100252451
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvi01009
]
100252451
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100252451
03036 Chromosome and associated proteins [BR:
vvi03036
]
100252451
Protein phosphatases and associated proteins [BR:
vvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100252451
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100252451
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100252451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
100252451
NCBI-ProteinID:
XP_019078546
UniProt:
D7TBU2
LinkDB
All DBs
Position
11:join(3781278..3781347,3782030..3783204,3784477..3784836)
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AA seq
534 aa
AA seq
DB search
MLQGRIPVEREIFPGAIFCLTKQRFPSVQHWGIATMIKQILSKLPRKSSKSDTLASAGSD
SNNNTNLGSSIQCSNGLNVVRRMSSAVFPSMVAAGAEAVEPHLSFKDVPNTEKQKLFVSK
LNLCCVVYHFNDPDKDQAEKDSKRQALIELVDFVASGSAKFSEAAIAATCKMCAINLFRD
FPPKYRSNSTGGETEDEEPMFDPAWSHLQIVYDLLLRFVSYSSLDVKVAKKYVDHSFILR
LLELFDSEDPRERDCLKTILHRIYGKFMVHRPFVRKAVSNIIYRFVFETERHNGIAELLE
IFGSVISGFALPLKEEHKMFLSRALIPLHKPKSVGIYHQQLTYCVVQFIEKEPKLASVVI
KGLLKYWPVTNSQKELMFLSELEEILEMTGVVEFQKIMVPLFRRIGCCLNSSHFQVAERA
HFLWNNEHVLNHITQNRQVILPLVFPALERNTRNHWNQAVLNLTLNVRKMFCEMDEELVL
ACQGKLEEEDSKSSMAAEKRRLTWERLETAASFQPVGGGNISFLVNPATCSVTC
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagggtagaattccagtggagagagaaatttttccaggagccattttctgccta
accaaacagcgttttccttctgttcaacattggggcattgctaccatgattaagcaaatt
cttagcaaactccctcggaaatcatcaaaatctgacacattggcttctgctgggagtgat
tcgaacaacaatactaacttgggcagtagtatccaatgtagcaatgggttgaatgttgtt
agacggatgtcttcagctgttttcccatcaatggttgcagctggagcggaggcagtggag
ccccatctatccttcaaagatgttccaaatacagagaagcagaaattgtttgtcagtaag
ttgaacctctgttgtgtggtttaccatttcaatgatccagacaaggatcaagcagagaaa
gattctaaacgccaagccttgatagagcttgttgattttgttgcttctggatctgcaaag
tttagtgaagcagcaattgctgcaacatgcaaaatgtgtgcaattaacctttttagggat
tttccaccaaagtatcgctctaattctactggtggagaaacagaagatgaagaaccaatg
tttgatcctgcttggtcacatttacaaattgtgtatgatctactcctccgatttgtcagt
tatagttctcttgacgtaaaggtagcaaagaagtatgttgatcattcttttattttgaga
ctacttgagctctttgattctgaggatccaagggaaagagactgtttgaaaacaattctc
catcggatttatgggaagtttatggttcacaggccttttgttcgaaaggctgtgagcaac
ataatttatcgctttgtttttgaaactgagcggcataatgggattgctgagcttttggaa
atatttggaagtgtaattagtgggtttgctttgccattgaaggaggaacacaagatgttt
ctatcaagggctctgattcctttgcacaaaccaaaatcagttggtatttaccatcaacaa
ttgacatattgtgttgtacagtttatagaaaaggagccaaaattggccagtgttgtaata
aagggactgctaaaatactggcccgtaacaaatagccagaaggagttgatgttcttgagt
gagttggaagagatcttggagatgactggcgtggtggaatttcaaaagatcatggtccca
ttatttcggcgtataggatgctgcctcaatagctcccatttccaggtggctgaacgagca
cactttttgtggaacaatgagcatgtcctcaaccatataacacaaaaccggcaggtaatt
ctgcctcttgtcttcccagccctagagcggaacactcggaaccactggaatcaagcggtg
ctcaacctgactctaaatgtgcgaaagatgttctgcgagatggatgaagaactggtactt
gcctgccaaggtaaattggaggaggaagattcaaagtcaagtatggcagctgagaagcgg
agattgacatgggagcgcctggaaactgctgctagcttccagcctgtaggtggtggtaat
atttcatttctggtaaatccagccacatgctctgttacctgctga
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