Vitis vinifera (wine grape): 100252629
Help
Entry
100252629 CDS
T01084
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03440
Homologous recombination
vvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100252629
03460 Fanconi anemia pathway
100252629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100252629
04121 Ubiquitin system [BR:
vvi04121
]
100252629
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100252629
Membrane trafficking [BR:
vvi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100252629
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100252629
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
100252629
RecA family proteins
100252629
FA (Fanconi anemia) pathway
Other FA pathway factors
100252629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
DnaB_C
AAA_22
PAXNEB
Motif
Other DBs
NCBI-GeneID:
100252629
NCBI-ProteinID:
XP_002273803
UniProt:
D7TC85
LinkDB
All DBs
Position
11:join(344498..344578,344992..345136,345253..345363,345509..345600,346334..346428,346505..346618,348338..348467,348743..348864,348999..349122)
Genome browser
AA seq
337 aa
AA seq
DB search
MEQQKMAQAHEEVEDMQHGPFPVEHLQASGIASLDIKKLKDAGLCTVESVAYSPRKDLLQ
IKGISEAKVDKIVEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGLETGSI
TEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNG
ADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ
MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLAL
RKGRGEERICKVISSPCLAEADARFQISAEGVTDVKD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagaagatggctcaagcacacgaggaagtggaagacatgcagcatggtcct
ttccctgttgaacatctgcaggcatcgggcattgcatcccttgacataaagaagcttaaa
gatgcgggtctctgcaccgtagaatctgttgcatactctccaaggaaagatcttctgcaa
atcaaaggaattagtgaagctaaagttgacaagattgttgaagcagcttccaaactagtc
ccactgggttttactagtgctagccaactccacgcccaaaggcttgagatcattcagata
acatctggatcaagagaacttgacaagatattggaagggggacttgagactggatctata
actgagatatatggagagttccgctctggaaagactcagctctgccacacactctgtgtc
acttgccaactaccattagatcaaggaggtggtgagggaaaagcaatgtacattgatgct
gagggcacattcagaccacagagacttttacaaatagcagacaggttcggactgaatggt
gctgatgttttggaaaatgtggcttatgctagagcatataacactgatcatcagtcgagg
cttttgctagaagcagcatcaatgatggtggaaacaaggtttgctcttatgatagtagac
agcgctactgctctctatagaacagatttttctggaaggggagaattgtcagctaggcaa
atgcatcttgctaagttcctaaggagccttcagaaattagcagatgagttcggtgtagct
gttgttatcacaaatcaagttgttgctcaagtggatggttctgccatctttgctggacct
caaatcaaacctattggtggtaacattatggctcatgcttccacaacaaggctcgctctt
cggaagggaagaggggaggagcgcatctgtaaagtaataagttctccttgtttagctgaa
gctgatgcccggtttcagatttctgcagaaggtgttactgatgtgaaggactga
DBGET
integrated database retrieval system
