Vitis vinifera (wine grape): 100252922
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Entry
100252922 CDS
T01084
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100252922
Enzymes [BR:
vvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100252922
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
100252922
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HopW1-1
YtpI
Motif
Other DBs
NCBI-GeneID:
100252922
NCBI-ProteinID:
XP_010659681
UniProt:
F6I4R5
LinkDB
All DBs
Position
14:complement(join(1193073..1193177,1193294..1193518,1193958..1194311,1194397..1194511,1195657..1195700,1195824..1195920,1196243..1196406,1196823..1197083,1197399..1197796,1199162..1199276))
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AA seq
625 aa
AA seq
DB search
MDGHDLEMEKARLLSLALDFGFDEESAMKCLDRLVHLYGDDGQDFITVEHCGDDFLAALV
ESVEDSEDWDDLQAIETEACGTLNDMFDNDVLHGYGSDYGIYREGYINATEYSYEPQKHQ
NFVQLDSSSDSEDSSFRILDKKGAAPTSPSWPDGSSSAFTQSSIKHASRSVDSKISVIQG
SVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTK
RDCFVLMPTGGGKSLCYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNFGIPATFLSSQQ
TASQAAAVLKELRKDKPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVS
QWGHDFRPDYRELGCLKQNFPDVPVMALTATATQPVRKDILNSLRIPHALVLETSFDRSN
LKYEVIGKTKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAG
LSARQRIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGR
DDLPAVCMALYQKKDFSRVVCMLRNGHGCKSETFKEAMTQARKMQQYCELKTECRRQTLL
EHFGESLDRKACKNGCNPCDNCLKT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcacgatctagagatggaaaaagctcgactgctgagcctagccctcgatttc
ggattcgatgaagaatctgcaatgaaatgtttggatcgtttggtccatctctacggtgat
gatggtcaagattttatcaccgtggagcattgtggtgatgattttcttgcagcgcttgtt
gaatccgtggaagatagcgaagattgggatgatttacaagctattgaaacagaagcttgt
ggaactttgaatgacatgtttgataacgatgtccttcatggttatggatcagattatggt
atttatagagaaggctatatcaatgctacagaatattcatatgaacctcaaaagcatcaa
aattttgtacagttagattcttctagtgacagtgaagattcaagttttagaattctagac
aagaagggtgctgcaccaacctccccctcttggccagatggaagcagtagtgcattcacc
cagagttcaatcaaacatgcttcaagatctgtggactccaagatcagtgtcattcaaggt
tcagtttcatcgatttccaataaaagggcacgctctcaaatgtcagaagatgaaaatggg
actctcagttatgaggccttactggatttggatgattttgaactggcaaatgtcgtgata
tttggcaaccggacatttcgaccacttcagcatcaggcttgtaaagcatctgtgacaaag
agagattgctttgttcttatgcccactggaggtggtaaaagtttatgttaccagcttcca
gctactctgcaaccaggtgttacagtcgttgtatgtcccttactttcactcattcaggat
cagataatcacactgaacctcaattttggaataccagcaacctttttgagttcacaacaa
actgcatcccaagcagcagctgtcctcaaagagctaaggaaagataaaccatcttgcaag
ctcttgtatgtaactcctgagagaattgctggaaactctacattctttgagatcctaaaa
tccttgcattggaagggacaattagccggctttgttgttgatgaggcacactgtgtgagt
caatggggacatgatttccgtccagattatagggaattaggatgtctcaaacagaatttt
cctgatgttccagtgatggcattaactgccactgcaacacaacctgtccgcaaggacatc
ttaaattctttaagaatcccccatgctcttgtccttgagacaagctttgatagatccaac
ttaaagtatgaagtgattggtaagaccaaggagccactgaagcagcttggacaactacta
aaggatcgtttcaaaaatttgtgtggaattgtatactgcctttcaaaaagtgaatgtgca
gaggtttcaaagtttttgaatgggaaatgcaagatcaagacagtatactaccatgctgga
ttatcagctcgccaaagaattgacgttcaaaagaagtggcatacagggaaggttcacatc
atatgtgcgactattgcctttgggatgggaatcaacaagccaaatgttcgttttgttatc
cataatacaatgtccaaatcaatcgaaaactattatcaagaatctgggagggcaggaaga
gatgaccttcctgcagtgtgcatggctctgtaccagaagaaggatttcagtcgggttgta
tgcatgttacgaaatgggcatggatgcaaaagtgaaaccttcaaggaggcgatgactcaa
gctcgtaagatgcagcagtactgtgaactcaagaccgagtgtagaagacaaaccttgctt
gaacattttggagaatccttagacagaaaagcctgcaagaacggctgtaatccttgtgat
aactgtctcaaaacttag
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