Vitis vinifera (wine grape): 100253255
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Entry
100253255 CDS
T01084
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100253255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100253255
04121 Ubiquitin system [BR:
vvi04121
]
100253255
03036 Chromosome and associated proteins [BR:
vvi03036
]
100253255
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100253255
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100253255
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100253255
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100253255
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100253255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT
BRCT_2
zf-HC5HC2H_2
RTT107_BRCT_5
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
100253255
NCBI-ProteinID:
XP_059593959
LinkDB
All DBs
Position
7:join(7331070..7331072,7331806..7331866,7331956..7332050,7332197..7332297,7332594..7332780,7332905..7333011,7333781..7333856,7334923..7335088,7335612..7335730,7336127..7336471)
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AA seq
419 aa
AA seq
DB search
MSPKKNPAKRQKKLNVGHLESGSISGPHLRSNSGSSDVKEIVCGFCQSSKLSMATGPMLH
YANGKPVQSSNIFDSNVIHVHKKCVDWAPRVYYAGETIINLEKELERSGQLECSGCGLKG
AALGCYMKHCRKSFHVLCAMKILHCRWDFENFLMFCPSHSSLKFPSEKSQFGEKSTKNNS
KSTQISFGASSQKGVTEWVLCGSALSTKEKFLLVKFGETICVSVSKYWNPNVTHVITATD
VNGACCRTIKVLMAILHGGWILKIDWVKACMEALYLVDEEPYEVSLDNYGCRDGPKTGRL
RSLDNAPKLFKDLIFYFIGDFVPTYKIDLVDLIRAAGGFVLACKNKLVAQVHDGRIAPST
ALVVYNLEPPQGSMLREDDPVMLWKREAEVLAAMIGSHVISDRWILDSIAACRLQPFTL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaaaaaaaaatccagccaagagacaaaagaaattgaatgttggtcatctagag
tctgggtctatttctggtccacatctacgatcaaattcaggctcttcagatgtgaaggaa
attgtctgcggtttttgccagtcatctaagctttcaatggctacgggaccaatgctgcat
tatgctaatggaaagccagttcaatcatccaacatatttgattccaatgtcatacatgtt
cataagaaatgtgttgattgggcaccacgagtatattatgctggtgaaactattataaac
ttggagaaagaactggagaggagtggacagcttgagtgcagcggctgtgggcttaaggga
gctgcacttggctgctacatgaagcactgccggaaaagttttcacgtactttgtgccatg
aaaatcttacattgtcgttgggacttcgaaaattttttgatgttttgtcctagtcatagt
tcactcaagttcccgagtgaaaagtctcagtttggggagaaaagcactaaaaacaattcc
aagtcgactcaaataagctttggagcatcctctcaaaagggagtaacagaatgggttcta
tgtggatctgccctatctaccaaagagaagtttcttttggtcaagtttggagaaacaatt
tgtgtaagtgtatctaagtactggaacccaaatgtcacacatgtaatcactgccacagat
gtgaatggtgcttgctgcagaacaattaaagtcctcatggccattttgcacggaggatgg
attcttaagattgattgggtaaaggcatgcatggaagctctatatcttgttgatgaagaa
ccttatgaagttagccttgacaattatggttgtcgtgatggtccaaaaacaggccgactt
aggtcattggataatgctccaaaactattcaaagacttgattttttactttatcggtgat
tttgtgccaacatacaaaatagaccttgtggatctaatcagagcagcaggaggttttgtc
ctggcctgcaagaacaagctggtggcacaagtccatgatggcaggatagctccttcaaca
gcgctggttgtttacaacctcgagccgcctcaagggtccatgctgagggaagatgaccca
gtcatgctgtggaaacgagaagcagaggttttggctgctatgattggttcacatgtgatt
agtgatcgatggattttagactcaattgctgcatgcagattgcagccctttaccctttga
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integrated database retrieval system
