Vitis vinifera (wine grape): 100253453
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Entry
100253453 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100253453 isoform X2
KO
K13210
far upstream element-binding protein
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100253453
03041 Spliceosome [BR:
vvi03041
]
100253453
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100253453
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100253453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_N4BP1_1st
Motif
Other DBs
NCBI-GeneID:
100253453
NCBI-ProteinID:
XP_002277528
UniProt:
F6HN29
LinkDB
All DBs
Position
18:complement(join(33926133..33927416,33930812..33930928,33931049..33931120,33931211..33931312,33931486..33931671,33935391..33935746,33937116..33937317))
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AA seq
772 aa
AA seq
DB search
MAEEEVVVVAGASPAPSDHKRKLEDLEPEAPEQAEPDGVQGADAGDYVANDESEAKRPRV
EDQDDDLATENGYQREKEDEVIKENVELTVENAQSQEAPHPTEEAPEAVNDEQPSTDNEQ
KEDTQEPSIENPQLENPQQPTGEEFEKPAEEIPQQEVGDVPSAEVQQQPTSETQTMSRKM
EVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKAEK
LIKDVIAEADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTR
SGARIQLIPQHLPEGDQSKERTVRVTGDKKQIEMAREMIKEVMNQPVRSSTYPGSYNQQG
YRPRGPTGPSQWGPRGPHPGQPTGYDYQRGAYPSQNQQYAPPSYGGYPPQQMAPRSSFGS
GWEQRPPANMQGPPQSGGYDFYGGQGGHGPDAPAAAPHSASMSIHAPGPSPSPGMGPPPS
QGNYNYGQPQGPDYGQQAQYSQTGPPQQGYGHGYDEPKYEGQAPTHPPYGGHGSQPVYPQ
GGAQSGYPPQQPYGKPQSYGMASQAPAAQSYGPPRASQPGDVPYQGPMSSNQSYGPNVPP
QQYPYASSGPMQQSYPAYGSQPAADGYNQPQPASGPGYPQQGGQPMSGYSQPGGQQAPGY
AQVGPQGGYGPYPSQPGYAEQQTANNAAYGYQGSADPTYNSGPASAYGAQPSGQPGYVQP
TPTQPSYDQSIPAQSGGYGAVPATAPVGYGKSLSPQPGYPQYDATQMYGAHR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagaggtcgtcgtcgtcgccggcgccagccccgcgccgtccgatcacaag
cggaagctcgaagatttggagcccgaagccccggagcaggcggaaccggacggtgtccag
ggcgctgacgcgggggactatgtggcgaacgatgagtcggaggcgaagcgtcctcgggtc
gaggaccaggatgatgatttagcgactgagaatggataccaaagggagaaagaagatgag
gtcataaaggaaaatgttgaactgactgtggagaatgcccaatcacaggaagctccacat
ccaactgaggaagctccagaggctgtgaatgatgagcaaccttctactgataatgagcag
aaggaggatacccaagaaccctcaattgagaatcctcagttggaaaatcctcagcaaccc
actggagaggaatttgagaaacctgctgaggaaattcctcaacaagaggtcggggatgtt
ccctctgctgaagtgcaacagcaacctacatcagagactcagacaatgtcacggaaaatg
gaggtccctaataataaggttggggttcttattggtaaagctggcgatactatacggttc
cttcagtacaactcaggggcaaaaatccagatcacaagggatgctgatgcagatccatat
tctgcctcaaggcctgtagaactaataggaagcttggaaaacataaacaaggctgagaaa
cttataaaggatgttattgcagaggctgatgcagggggttctccttcccttgtagctaga
ggttttgctactgcacaggctgttggggctgcagaacaagttcagatacaagttccaaat
gagaaggttggtttaatcataggcaaaggtggggaaaccattaaaagcctgcagaccaga
tcaggggctcgcatccagttgatacctcaacatctccctgaaggagaccaatctaaagaa
aggactgtgagagttactggtgacaagaagcaaattgagatggctagagaaatgataaag
gaagttatgaatcagcctgtgagatcatcaacctacccaggcagttataaccaacagggc
tatcgacctcgtggtcccactggaccatctcaatggggcccgcggggtccacatcctggg
cagccaacagggtatgattaccaacgaggagcttatccatctcagaatcagcagtatgcg
ccgccttcatatggtggttatcctccacaacaaatggccccaagaagcagctttggttca
gggtgggagcaaaggccccctgctaacatgcaggggcctccacagagtggtggctatgat
ttctatggtggacaaggaggccatggtcctgatgcccctgctgctgctccacattctgct
tctatgtccattcatgcacctggtccttcccccagccctgggatgggtccacccccttcc
caaggaaattacaattatggacagccacagggtccagattatgggcaacaggctcagtat
tcccaaacaggacctcctcaacagggctatgggcatggatatgatgaaccaaaatatgaa
ggtcaggctccaacacatcctccatatggaggacatggttctcagcctgtttacccacaa
ggtggtgctcaatcagggtatcccccacaacagccatatggtaagccacaatcatatggc
atggcatcacaggcaccagcagcacaatcctatggcccacctagggctagtcaacctggg
gatgttccttatcaaggtcccatgtcttcaaaccaatcatatggtccaaatgtacctcca
caacaatacccatatgcatcaagtgggcccatgcagcaatcttatcctgcttatgggtct
caaccagctgctgatgggtataatcagccacaaccagcatccggcccaggatatccacag
caaggtggccagcctatgtcaggttacagtcaacctggtggacagcaggcaccaggctat
gcgcaagtgggtcctcaagggggttatggcccatacccttcacaaccaggatatgctgaa
caacagactgcaaacaatgcagcttatggataccaagggtctgcagatcccacttacaac
agtgggcctgcctcagcctatggtgcacaaccaagtggccagccaggttatgtccaacca
acgcctactcagccaagctatgatcagtcaatccccgcacagtcaggtggctatggagct
gtaccagcaactgcaccagttggttatggaaaaagtttgtcaccccagccaggttatcct
cagtatgatgcaactcagatgtatggtgcgcatcgctga
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integrated database retrieval system
