Vitis vinifera (wine grape): 100253485
Help
Entry
100253485 CDS
T01084
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100253485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100253485
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100253485
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100253485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
100253485
NCBI-ProteinID:
XP_002271636
UniProt:
F6HHC1
A0ABY9C3Y2
LinkDB
All DBs
Position
6:24238012..24238848
Genome browser
AA seq
278 aa
AA seq
DB search
MFSEDSDCNSKPVMIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQF
RLRRPSDHYRFLKSNVDALCLIQVGLTLSDANGNLPDLGTGNRFIWEFNFRDFDVARDAH
APDSIELLSRQGIDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKI
LTRRSLPSGLEEFLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGKCHQ
AGSDSLLTWHAFQKIRDVYFEKDGTEKYAGVLYGLEVF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgaagattccgattgtaattcaaaacccgtgatgatccgggaggtgtgggct
gagaatttagagtccgaattcgagttgatcagcgacctcatcgatcagtacccttttatc
tccatggacaccgagttccccggggtggtattccgtccctccggcggtgaacaacagttc
cgcctgcgtcgcccttcggatcactaccggttcttgaagtccaacgtcgacgcgctctgc
ctcatccaggtaggcctcacgctctccgacgccaacggcaatctccccgatctgggcacc
gggaacaggttcatctgggagttcaacttccgggacttcgacgtggcgcgtgacgcccac
gctccggactccatagagctcttgagccgtcaagggattgacttcgacagaaaccgggaa
gaaggggtggactcggcgcggttcgcagagttgatgatgtcgtcgggacttgtgtgtaac
gagtcagtgagctgggtgacgtttcacagcgcgtacgattttgggtacttggtgaagata
ctcacgcgccggtctctgccgagtgggttagaggagtttttaagtattctgagggtgttt
ttcggaacaaaagtatacgacgtgaagcacctgatgaaattctgtgcaagcttgtacgga
gggttggaccgggtggcgaggacgctggaggtggaccgggcggttgggaagtgccatcag
gccggttccgatagcttgctgacgtggcatgcattccaaaagattagagacgtttacttt
gagaaagatggaacggagaagtacgccggtgtcttgtatggattggaagtattttag
DBGET
integrated database retrieval system
