KEGG   Vitis vinifera (wine grape): 100253517
Entry
100253517         CDS       T01084                                 
Name
(RefSeq) protein PIR isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100253517
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100253517
   Factors involved in mRNA localization
    Other mRNA localization factors
     100253517
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd WASH-4_N
Other DBs
NCBI-GeneID: 100253517
NCBI-ProteinID: XP_059592324
LinkDB
Position
4:join(15937676..15937729,15940387..15940459,15944956..15945020,15945204..15945281,15946826..15946945,15947043..15947113,15959700..15959792,15969048..15969117,15969300..15969364,15969568..15969763,15970150..15970301,15982734..15982827,15983420..15983635,15988057..15988268,15990717..15990864,16002346..16002514,16012667..16012743,16014959..16015129,16016038..16016114,16016204..16016306,16017871..16017990,16018117..16018260,16022231..16022380,16039990..16040133,16046101..16046188,16046984..16047111,16054808..16055015,16058200..16058372,16059293..16059499,16060393..16060587)
AA seq 1286 aa
MAVPVEEAIAALSTFSLEDDQPEVQGPAVWISTERGATQSPIEYTDVSAYRLSLSEDTKA
LNQLNSLIQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVHWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELAMYFQKFSTQTRLLTLPSPHELPPREAQDYQRHYLIINHIGAI
RSEHDDFTVRFALSLNQLLLLKSSDSADVEWCKEVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKVSVPMESYEASGSFSDYEKVVRYNYSAEERKGLVELVSYIKSIGSMMQRC
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSRPE
SDLQPLQHGGEESRGTFFHPRPVAPTSAQVHCLQFLIYEVVSGGNLRKPGGLFGNSGSEI
PVNDLKQLETFFYKLSFFLHVLDYTVTVATLTDLGFLWFREFYLESSRVIQFPIECSLPW
MLVDHVLDSQNAGLLESILMPFDIYNDSAQQALVVLKQRFLYDEIEAEVDHCFDIFVSKL
CDNIFTYYKSWAASELLDPSFLFALDNGEKYSIQPMRFTALLKMTRVKLLGRTIDLRSLI
AERMNKVFRENLEFLFDRFESQDLCCIVELEKLLDVLKHAHELLSKDLLMDAFNLMLSEM
QENISLVSYSSRLASQIWMEMRNDFLPNFILCNTTQRFVRSSKVPSVPVQRPSVPSAKPN
FYCGTQDLNSAHQTFAQLHSGFFGMAHMFSIVRLLGSRSLPWLIRALLDHISNKIATLEP
MITGLQEALPKSIGLLPFDGGVTGCMRLVRENLNWASKPELKCEVLRGIKEIGSVLYWMG
LLDIVLRELDTTHFMQTAPWLGLIPGVDGQILQGQDCGDSPVVTLFKSATAAIVSNPGCL
DPTSFHTLSKQAEAADLLCKANMNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFLDITT
SKDFYRIFSGLQIGHLEESVQLPPNNHEILGDSVAWGGCTIIYLLGQQLHFELFDFSYQV
LNVAEVEVAALIQTHKNPHLAQGWECLLEAMKKARRLNNHVFSMLKARCPLEDKVACAIK
QSGAPLHRIKFENTVSAFETLPQKGV
NT seq 3861 nt   +upstreamnt  +downstreamnt
atggcggttccagtggaggaagccattgcagcactatcaactttctcattggaggatgac
caaccagaggttcaaggacccgctgtttggatctccactgaaagaggtgcaacccagagt
ccaattgagtacactgatgtttctgcataccgtctctctctatcggaagacaccaaagct
cttaatcagctgaatagccttattcaagaagggaaagagatggcgtcagtactttataca
tatcgcagttgtgttaaagctcttcctcagcttcctgattctatgaaacaaagtcaagct
gacttgtatttagaaacttatcaagtgcttgacttggagatgagtcgtttgcgtgaaatt
cagagatggcaggcgtcagctgcatccaaactagcagctgatatgcaacgcttttctagg
cctgagcggcgcatcaatggccctacaataactcatctctggtctatgttgaaattacta
gatgtgttggtgcaacttgatcatcttaagaatgcgaaagcaagcatacctaatgatttc
tcttggtataagaggacatttactcaagtcagtgtccattggcaagacactgactcaatg
agggaggagttggatgatttacagattttcttaagcacgagatgggctattttattgaac
ttgcatgtagagatgttccgtgtgaacaatgtagaagacattcttcaagtgctcatagtc
tttgctgtggagtcattagagttggattttgcactcctgtttccagagcggcatattctt
cttcgtgttttgcctgttctagttgtcttagctacctcgtcagagaaagatagcgagtca
ctgtataaaagggtgaaaatcaatagactgatcaacatattcaagaatgatccagtcatc
cctgcattcccagatcttcatctttctcctgctgcaatcttgaaggaattagcaatgtac
ttccaaaagttttctacccaaactcgtcttctcactctcccatcacctcatgagctccca
ccacgagaggcacaagattatcagagacattacctgatcatcaatcacattggagctatt
cgttctgaacatgatgatttcactgttcgttttgctttatccttgaaccagttattgtta
ttgaaatcatcagatagtgcagatgttgagtggtgcaaagaggttaagggaaacatgtac
gacatggttgttgaaggttttcagcttttaagtagatggacagcacggatttgggagcaa
tgtgcatggaaattttctcgcccttgcaaagtttcagttcctatggaatcatatgaagct
tcaggttcattttctgactatgaaaaggtggtacgatataattacagtgcagaggaaagg
aaaggtctagttgaacttgtgagctacattaagagcattggatcaatgatgcaacggtgt
gatacattggtggctgatgctttatgggaaacaatccatgctgaggttcaagattttgtg
caaaacactttagcgactatgttacgtactactttccgaaagaaaaaggacctttctagg
attctttctgatatgcggaccctttcagcagactggatggcaaatacgagcagacctgaa
tctgacttgcaacctttacagcatggaggtgaagaaagcagaggaaccttctttcatcca
aggcccgttgcaccaacatcggcacaggtgcattgcttgcagttcctgatatatgaggtg
gtatctggtggcaatctgaggaagcctggggggctctttggaaatagtggttctgagatt
cctgttaatgatctaaaacagttggaaaccttcttctataagcttagctttttcctgcat
gtgctggactatacagtgactgttgcaactttgactgatcttggtttcctatggtttaga
gaattttatttggagtcttctcgtgttattcagtttcccattgaatgctctcttccctgg
atgttggtggatcatgtgttagattcccagaatgctggtcttcttgagagtattctgatg
ccatttgacatctataatgattctgctcaacaagcattggttgtgctaaagcaacgcttc
ctctacgatgaaattgaggctgaggtggaccattgttttgatatatttgtttcaaaatta
tgtgacaatattttcacatactacaaaagttgggctgcaagtgagctacttgatccatca
ttcctctttgccttggacaatggagagaaatattctatccaacctatgaggttcactgca
ctgttaaaaatgactagagtaaagttacttgggcggacaattgatttaagaagtttaatt
gccgaacgcatgaacaaagtattcagagagaaccttgaatttctctttgatcgatttgag
tcccaggatctctgttgcattgttgaattagaaaagctcctggatgttttaaaacacgca
catgaattgttgtcaaaagatcttttaatggatgcattcaatctcatgttaagtgagatg
caagagaatatatctcttgtttcatattcaagtcgacttgcttcgcagatttggatggag
atgcgaaatgatttcttaccaaacttcattctttgcaatactactcaacgttttgttcgg
tcatcaaaagtgccctctgttcctgttcaaaggccatctgttccctctgctaagcctaat
ttctattgtggcactcaagatttaaattctgcacatcaaacttttgcacaacttcatagt
gggttttttggaatggctcatatgttttccattgtcagacttctggggtccagatcattg
ccttggcttatcagagctcttcttgatcatatatcaaacaagatagcaacacttgaaccg
atgattacaggactgcaagaagcattgccaaaatctattggactgcttccttttgatgga
ggtgtaacaggttgtatgaggcttgttagagaaaatcttaactgggcgtcgaagccagaa
cttaaatgtgaggttcttcgtggaattaaggagatcggaagtgtgctatattggatgggg
cttcttgatattgtattgagagaattagatactacacatttcatgcaaacagcaccttgg
ttgggcttgattcctggtgtagatggacaaatattgcaaggtcaagattgtggagacagc
cctgttgtcaccttgtttaaatctgctactgctgcaattgtgtcaaatcctggatgctta
gatccaacctctttccataccctatcaaaacaggcagaagctgccgatctgttgtgcaag
gctaacatgaatactgggagtgtgctggaatatgcccttgcttttacaagtgcagccttg
gataaatattgcagtaaatggagtgctgctccaaagactgggttccttgacatcactact
tcaaaggacttctatcgtatattcagtggccttcagattggacacctggaggagtctgtt
caattaccaccaaacaaccatgaaatattgggtgattctgttgcttggggtggttgtact
ataatatacttgcttggacaacagctgcattttgagctgtttgacttttcatatcaagtt
ctcaatgttgcagaagtggaggttgcagcactcatacaaacacataagaatcctcatctt
gcccaggggtgggaatgcctattagaggctatgaagaaagcaaggaggttaaacaatcac
gtcttctccatgctgaaagcgcggtgccccctggaagacaaggtggcatgtgctattaag
caaagtggcgcccctctgcaccgcatcaaatttgaaaacaccgtttctgcatttgaaaca
ttgccccagaaaggtgtctga

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