KEGG T01084: 100253666

Vitis vinifera (wine grape): 100253666

Entry

100253666         CDS       T01084

Name

(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1

K01873

valyl-tRNA synthetase [EC:6.1.1.9]

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100253666
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vvi01007]
    100253666
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100253666
Enzymes [BR:vvi01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     100253666
Amino acid related enzymes [BR:vvi01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   100253666
Transfer RNA biogenesis [BR:vvi03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100253666
Prokaryotic type
    100253666

SSDB

Motif

Pfam:

tRNA-synt_1 Anticodon_1 tRNA-synt_1g Val_tRNA-synt_C tRNA-synt_1_2 tRNA-synt_1e

Other DBs

NCBI-GeneID:

100253666

NCBI-ProteinID:

XP_010660308

LinkDB

Position

14:complement(join(15657164..15657292,15659888..15660054,15660211..15660283,15661485..15661586,15661727..15661831,15663101..15663239,15666022..15666134,15666220..15666270,15669045..15669182,15669347..15669457,15670814..15670925,15671958..15672047,15682801..15683021,15684555..15684671,15684784..15684901,15685004..15685152,15693895..15693978,15698373..15698448,15713741..15713808,15713909..15713961,15721081..15721134,15721408..15721499,15723420..15723514,15726640..15726723,15727334..15727460,15727744..15727828,15728141..15728267))

AA seq 959 aa
MAFSTPSLLSSCSAYRLNPLLFSHRRLRIRLSHSHLKPRFFAVAARENDVFTSPETAKPF
DFTSEERIYNWWDSQGYFKPNLDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYH
RMKGRPTLWIPGTDHAGIATQLVVERMLASEGIKRAELSRDEFTKRVWEWKEKYGGTITN
QIKRLGASCDWTREHFTLDEQLSRAVIEAFVRLHERGLIYQGSYMVNWSPNLQTAVSDLE
VEYSEEPGTLYYIKYRVAGGSKSDYLTIATTRPETLFGDTAIAVHPQDDRYSRYIGRMAI
VPMTFGRHVPIISDRYVDKDFGTGVLKIIPGHDHNDYLLARKLGLPILNVMNKDGTLNEV
AGLYCGFDRFEARKKLWLDLEETGLAVKKEPHTLRVPRSQRGGEVIEPLVSKQWFVTMEP
LAEKALQAVQRGELTIMPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKDCEEE
YIVARNANEALEKAQEKYGKDVEIYQEPDVLDTWFSSALWPFSTLGWPDVSTQDFKKFYP
TTVLETGHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPID
TIKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAW
ETILACKFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFA
DWYIEASKARLYHSGGHSVAQAVLLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNS
SWPQTSLPMHASSIKKFENLQSLTRAIRNARAEYSVEPAKRISASIVAGNEVIQYISKEK
EVLALLSRLDLQNIHFTDSPPGDANQSVHLVAGEGLEAYLPLSDMIDVSAEVERLSKRLS
KMQEEFDRLAARLSSPKFVEKAPEEIVSGVREKAAEAEEKITLTKNRLAFLQSTAVVSK

NT seq 2880 nt +upstreamnt +downstreamnt
atggccttctcaacgccatccctcttatcttcctgctctgcttatagacttaatcctctt
ctcttctctcatcgccgtctcagaattaggctttctcattctcacttgaaacctagattt
tttgctgttgctgcaagagagaatgacgtctttacttcaccagagacagcaaagcccttt
gattttacttcagaagaaaggatatataattggtgggactctcaaggatattttaagcca
aatttggaccggggaagtgatccttttgttatttcgatgcctcctcctaatgttactggt
tcactgcacatggggcatgcgatgtttgtgactctggaggatatcatggttagataccat
cggatgaagggaagacctacactctggattcccgggactgatcatgctggtattgcgact
cagttggttgtggaaagaatgcttgcatctgaaggaataaaaagggctgaattgagtaga
gatgagttcacaaagcgagtttgggagtggaaagagaagtacggtggaaccattacaaat
cagattaagagactcggggcttcctgtgattggacaagggaacactttacccttgatgag
cagctaagtcgggctgtaattgaggcctttgttaggcttcatgagagaggcttaatttat
caagggtcttacatggtcaactggtctcctaatctacagactgcagtttcagatttggaa
gttgaatattctgaagaacctggtactctctattatattaagtatcgcgttgctggaggt
tcaaagagtgactatttgacaatagctacaacacgcccggagactttatttggagatacc
gccattgcagtacatcctcaggatgatcgctattctaggtatattggtaggatggcaatt
gtgccgatgacatttggccgtcatgttcctattatttctgacaggtatgttgataaagac
tttggaactggtgtgctgaagataatccctggtcatgatcataacgactaccttcttgct
agaaaacttggtctcccaatacttaatgtgatgaataaggatgggacacttaatgaggtt
gctggactgtactgtggctttgatcggtttgaggcacggaagaaactgtggttagatctt
gaggagacaggtttggctgttaaaaaggagcctcacacattacgagttcccagatcccag
cgtggtggagaagtaatagagcctctagtgagtaagcagtggtttgtaactatggagcca
ttagctgagaaggctcttcaagcagttcaaagaggagaattaaccattatgcctgaaaga
tttgagaagatttataatcactggctatcaaatattaaggattggtgtataagcagacaa
ctatggtggggacatcgcataccagtttggtatattgttggaaaagactgtgaagaagaa
tatatagttgctaggaatgccaacgaagctcttgagaaggctcaagagaagtatggaaaa
gatgtggaaatttatcaggaaccagatgttcttgatacttggttttcaagtgcgttgtgg
cctttcagtactcttggatggccagatgtgtctacacaggattttaagaagttttatccg
actacagtgcttgaaactgggcatgatatattgttcttttgggtggcaaggatggtcatg
atgggaattgagttcacaggggctgttcctttttcttatgtttatctacatggacttatc
cgggactcacagggaagaaaaatgtctaagacattaggaaacgtaatagatccaattgat
acaatcaaggagtttggcactgatgctttacgatttacccttgctttaggaaccgctggt
caggaccttaatctatccactgagagattgacctctaacaaggccttcactaacaaacta
tggaatgctgggaagtttgtgttgcaaaatttgcctagtcaaagtgatatctctgcttgg
gaaactatactggcttgtaagtttgataaagaggaggccctactcaggttacctttacca
gaatgttgggtggtctcgaaacttcattgtctcattgacatggtcaccactagctatgac
aaatatttctttggagatgtaggaagagaaacatatgatttcttttggggtgattttgct
gattggtatattgaagccagtaaagctcgcctttatcactctggaggtcattcagttgct
caggcagttcttttatatgtttttgaaaacatacttaaaatgctacatccattcatgccg
tttgtaaccgaggcattatggcaggcacttcccaatcgaaaagaagctcttatgaattct
tcttggccccagacttcattgccaatgcatgcaagctcaataaaaaagtttgaaaattta
caatctttgactagagcaatccgaaatgctcgagcagaatactctgttgaaccagcaaag
cgaatatctgcatctatagttgcaggcaatgaagtcatccagtatatttctaaagagaag
gaagttttagctcttctctccaggctagatttgcaaaacatccattttactgattctcct
ccaggagatgcaaatcaatcggtccaccttgttgctggtgaaggtctagaggcatatctc
cctctctctgatatgatagatgtttctgctgaagttgagcgactttccaagcgcctttca
aagatgcaagaagagtttgacaggcttgcagctcgccttagctctcctaaatttgtagag
aaagctcctgaagaaattgttagtggggttcgagaaaaggcagcagaagctgaagagaag
ataactctcaccaaaaaccgtctagctttcctccaatcaacagctgtggtctcaaaatag

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