Vitis vinifera (wine grape): 100253746
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Entry
100253746 CDS
T01084
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100253746
03400 DNA repair and recombination proteins [BR:
vvi03400
]
100253746
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100253746
DNA repair and recombination proteins [BR:
vvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100253746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
zf-ANAPC11
zf-C3HC4
zf-NOSIP
LETM1_RBD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100253746
NCBI-ProteinID:
XP_010644170
UniProt:
F6H212
LinkDB
All DBs
Position
19:complement(join(2289901..2290064,2290158..2290243,2292692..2292831,2300004..2300114,2300212..2300322,2300982..2301053,2301150..2301251))
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AA seq
261 aa
AA seq
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MASTSAAASRDNGVPGRLRNAASTLYSDNQSLIAEIRKAMILMKEVAVDLERDGQSQMVK
ELEDAVVELLGTSEDCTQFSAAIQSVGNEHQPRPELTDFKKLFEDEVAKLKASSSFAPQS
HPLLRQFREAVWNVHHAGQPMPGDEQEDIVMTSTQCNLLNITCPLSGRPVTELADPVRSV
DCKHIYEKKAILHYIKSKHGRAQCPVAACPKILQAERVVCDALLQIEIDEMKSMSKQPGR
TDVIEDFTELDDDDDEEEEDD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacctccgctgctgcttcccgcgacaatggcgtccccggaagactcaggaac
gccgcttccactctctactccgataaccaatctctcattgctgaaattcgaaaggctatg
attctgatgaaggaagtggcggttgatttggagagggacggccagtctcagatggtgaaa
gagcttgaagatgccgttgttgagttattgggaacatcagaagactgtacacaattttca
gctgcaattcagtctgttggaaatgagcaccaacccaggcctgagttaactgattttaag
aagttatttgaggatgaggttgcaaagctcaaggccagttcctcttttgctccacaaagc
catccattattacgtcaattcagggaagctgtttggaatgttcaccatgcaggacagcca
atgccaggtgatgagcaggaggacattgtaatgaccagtacacaatgcaacctcttgaat
attacttgcccattaagtggaagacctgttactgaattagcagatccagttcgcagtgtg
gattgcaagcatatttatgaaaagaaggccatcttgcactacataaaatccaaacatgga
cgcgctcaatgtcctgttgcagcttgcccgaaaatactgcaggcagaaagggtagtgtgt
gacgcattgttacaaattgaaattgatgaaatgaaatcaatgagtaagcaacctggtcga
actgatgtaatagaagatttcaccgagcttgatgatgatgatgatgaagaagaagaagac
gactga
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