Vitis vinifera (wine grape): 100253813
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Entry
100253813 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100253813
KO
K13091
RNA-binding protein 23/39
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100253813
Spliceosome [BR:
vvi03041
]
Common components
Common spliceosomal components
General mRNP proteins
100253813
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
100253813
NCBI-ProteinID:
XP_002279887
LinkDB
All DBs
Position
3:complement(join(1818269..1818310,1818397..1818511,1819532..1819620,1819701..1819950,1820058..1820122,1821132..1821215,1822778..1822852,1822973..1823059,1823922..1824156,1824415..1824470,1827579..1827635,1827737..1827818,1836923..1837515))
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AA seq
609 aa
AA seq
DB search
MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR
SKSGDDSRDHDRRKERGSSHPRSSSRDGERDRHRSSREHRERDRDRDRDREERNGKERDR
EKDRNRERDRDRDRRERDRESERERERERERERSRRSRSRSEKHLSERDEKDRERSRDRE
NKEREREREIRERDRETRRHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFS
RAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNL
VQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLET
GHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDEG
GGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAP
LVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKED
VQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQN
YEAKFPDSR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtatgattatttggagaaaactgttgaaaatcctgaatcacagaaa
gtgaaagagactgttaatgggggtgatgagactgttaaatcaggggaaaaggagcgtagt
cgcagttcaaagcataagagtgaggacaatgatgatgatttggatcgccgtttgaagcgc
tcaaaatctggagatgattctcgtgatcatgacaggcggaaagagaggggatcatctcat
cctcgctcatcatcccgagatggagagagggaccgccacaggagtagccgtgaacacaga
gaaagagaccgagacagagacagggatagggaggagaggaatgggaaggagagagacagg
gagaaagacagaaacagagagcgggatcgtgatcgggataggagagagcgggatcgcgaa
agtgagagagagagagagagggagagggaaagagagcgttcccgcagaagcaggagccga
tcagaaaagcatctaagtgaacgggatgagaaagacagggagaggagtcgggacagggag
aataaagaaagagaaagagagagggagataagggagcgggacagagaaaccaggcgacat
aaagataaaaaggaagaagtggcagagccagaggctgatcctgaacgggatcagaggacc
gtgtttgcttatcagatttgtttgaaggcggatgaaagggatgtctatgaattcttctcg
agagctggcaaggtacgagatgtgaggcttattatggaccgcaattcaagacgttccaag
ggagttggatatattgaattttatgatgcaatgtcagttcccatggcaatagcactctct
ggtcagcctctccttggtcaaccggtgatggtcaagccatcagaagctgaaaagaatctg
gttcagtcaactacagctgcagctggtggacctggagggcttatagggccctattcaggg
ggggctagaaggctgtatgtcgggaatttgcatttcaacattacagaagatcaacttcgg
caggtatttgaaccgtttggtactgtagaacttgtgcaactgcctactgatctggagact
ggacattgcaaaggttttggttttgtgcagtttgcacgtctagaagatgctagagctgca
caaagtttaaatggacaattggacattgctgggcggacaatcaaggtttcagtggttact
gatcaagcaggattgcaagatattggtgcaaatgcaggtgattttgacgatgatgaaggt
ggtggtttgtccctgaatgctcgttctagagcaattctcatgcagaagttggatcgcagt
ggcaccactccaggcattgctggttcacttggctcccctgtgcttaataaccctggcctt
cctctatcaacagcccctattcttggtgctgcacctgtagtgtcgcctcttgttgctcct
cttgtacaggccccggttcctggacttgcaggattgccaggtgctggtcttcaagttcca
gctgttactgttccttccattgacactattggtgtccccagcgaatgtttgatgttaaag
aatatgtttgatcccaaattagagacggagccagattttgatctggacattaaagaagat
gttcaagatgaatgctctaagtttggaacagtgaagcatatctatgtagacaagaatagt
gctggttttgtattcttgcgatttgaaaacacacaagctgcaataagtgcacaacgtgcc
ctacatggtagatggtttgctgggaagatgatcactgcaacattcatgctgccccagaac
tacgaggctaaattcccggatagcagatag
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