Vitis vinifera (wine grape): 100254022
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Entry
100254022 CDS
T01084
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100254022
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
100254022
NCBI-ProteinID:
XP_002285792
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Position
18:join(4433468..4433780,4434474..4434692,4436659..4437365,4438171..4438973,4439452..4439455)
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AA seq
681 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIPVFIWAPEEEGPYYPGRVSRWWLKQSL
AHLDSSLRSLGTPLITKRSTDCVSSLLEIVKSTGATLLFFNHLYDPLSLVRDHRAKEALT
AQGIAVHSFNADLLYEPWDVNDAQGHSFTTFSAFWDRCLSMPYDPEAPLLPPKRINPGDV
SRCPSDTIAFEDESEKGSNALLARAWTPGWSNADKALTIFINGPLIEYSKNSRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWMHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAAKARLQEA
LSEMWQAVAASRAAIENGTEEGLGDSESAPIAFPQDVQMEEIPEPVRNNPTTTAVRRYED
QMVPSMTSSFLRIEGEPSLDIQNSAENSRAEVPTNVNANQEPRRETLNRGVTHSVRSNNH
NLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGTSSS
YLQRHPRSHQLMNWKQLSQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggtgggtgtagcattgtttggttcaggagagatctgagggttgaggataat
cctgcactagcagctggtgtgagagcaggggctgtgattcctgtgtttatatgggcacct
gaagaggaaggcccctattaccctgggagggtctcaagatggtggctcaagcagagtttg
gctcaccttgattcctctttgaggagccttggcactcctctcatcaccaagagatctact
gactgcgtttcttctctccttgagattgtcaaatctaccggagctactcttctcttcttc
aatcatttgtatgatcccttgtcacttgtcagggatcaccgggcaaaggaggctttaact
gctcaaggcatagctgtacattcctttaacgcggatttgctgtatgaaccatgggatgtt
aatgatgcccagggccactcattcacaaccttctcagctttctgggacagatgccttagc
atgccctatgaccctgaggcacctctccttcctcccaaaaggattaacccgggtgacgtg
tcaaggtgcccctcagacacaattgcatttgaagatgaatctgagaagggtagcaatgca
cttcttgctcgagcatggacacctggatggagcaacgctgataaggccctaaccatattc
attaatggaccattaattgagtattctaagaatagtaggaaggctgatagtgctacaacc
tcatttctctctccccatttgcattttggggaggtgagtgtgaggaaagtattccatctt
gtccgcatcaagcaggtactgtgggccaacgaagggaacaaggctggtgaagagagtgtg
aacttgttccttaagtccattgggcttagggaatattcaagatacttgagttttaaccat
ccttacagtcatgaaaggccacttcttggacacctgaagttcttcccttgggttgttgat
gaaggctattttaaggcatggagacaaggtagaactggatatccattggtggatgctggc
atgagagagctatgggccaccggttggatgcatgatcggataagggttgtggtttctagt
ttttttgtgaaggttttgcagcttccatggcggtggggaatgaagtatttctgggataca
ctgttggatgcagatcttgagagtgatgctcttggttggcagtatatatctggtactctc
cctgatggccgtgagtttgatcgcatagacaatccacagtttgagggttacaaattcgac
cctaatggagaatatgtacgaaggtggctccctgaacttgctaggcttcctactgaatgg
atacaccacccatggaatgcaccagaatctgtactccaagctgctggaattgagttgggg
tcaaactaccctctccctattgtagagatagatgcagcaaaagccaggttgcaagaagca
ctttcagagatgtggcaagcagtagcagcttcaagagctgcaattgagaatggaaccgag
gagggccttggagactctgaatcagccccaattgcctttcctcaagacgtacaaatggag
gagattcctgagcctgtgaggaacaaccctaccactactgcagttagacgctatgaggat
cagatggttccaagcatgacttcttcttttctaaggattgaaggagaaccatctttggac
attcaaaattcagcagaaaatagcagagcagaagtcccaacaaatgttaatgcaaatcaa
gaaccaagaagggaaactcttaaccgaggggttacacactcagttcgaagcaacaaccac
aacctgccacaatttaatattatgatagggcggaatactgctgaagattccacagcagaa
tcttcaagcaccacaaggagagagagggatggaggtgtagttccagtttggtctccctca
acttctagttatgcagagcagtttgtgagtgaagagaatggcattggaaccagttcatct
tacttgcagaggcatccacggtctcaccagttaatgaattggaagcaactttctcaaact
gggtaa
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