KEGG   Vitis vinifera (wine grape): 100254062
Entry
100254062         CDS       T01084                                 
Name
(RefSeq) COP9 signalosome complex subunit 4 isoform X2
  KO
K12178  COP9 signalosome complex subunit 4
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100254062
Ubiquitin system [BR:vvi04121]
 Deubiquitinating enzyme (DUB)
  UBL-specific proteases (ULPs)
   COP9 signalosome (CSN) complex
    100254062
SSDB
Motif
Pfam: PSMD12-CSN4_N PCI CSN4_RPN5_eIF3a
Other DBs
NCBI-GeneID: 100254062
NCBI-ProteinID: XP_002283011
UniProt: E0CQ27
LinkDB
Position
18:join(10397705..10397834,10397934..10398085,10398584..10398687,10398796..10398856,10399622..10399714,10399812..10399912,10401161..10401269,10401357..10401401,10401611..10401679,10401782..10401873,10401991..10402033,10406156..10406215,10406734..10406793,10407061..10407135)
AA seq 397 aa
MDSAFASASAISDQRQKIEQYKLILSSVITSNDIAQARKFIDHMLSDDVPLVVSRQLLQI
FAQELGRLKPEAQKEIAHYTLTQIQPRCVSFEEQVLVIREKLAELYESEQQWSKAAQMLS
GIDLDSTMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
VCYARILDLKRKFLEAALRYYDISQIEKRQIGDELIDEEALEQALSAAVTCTILAAAGPQ
RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKAHQKALLPDNFTVLD
RAMIEHNLLSASKLYTNISFDELGTLLGIAPQKAEKIASRMIYEDRMRGSIDQVEAVIHF
EDDTEELQQWDQQIVGLCQALNDVLDSMAKKGLSIPV
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggacagtgccttcgcgagcgcctctgccatcagcgatcagaggcaaaagatcgagcag
tacaaactcattctttcctctgtcatcacatcaaatgacatcgcacaggccaggaaattc
atcgatcacatgttatcggacgacgttcctttggtggtctcgcggcaacttctgcaaata
ttcgctcaagaattggggaggctgaagccggaggcccaaaaggaaattgctcattatacc
cttactcagattcagccacggtgtgtgtcatttgaagaacaggtgttagttatcagagag
aagcttgctgagttgtatgagtccgagcagcagtggtcaaaggcagcacagatgctcagt
ggcattgatttagactccacaatgagggttattgatgatacattcagattgtcgaaatgt
gtccaaatagctcgtctatatcttgaggatgatgatgctgttaatgcggaagcttttatt
aataaagcctcattcttggttagcaacagtcagcatgaagtattgaatttacagtacaag
gtttgttatgctaggattttagatttgaagaggaagttcttggaggcagcattacgatat
tatgacatatcccaaattgagaaacggcaaataggagatgagttgattgacgaggaagca
ttggagcaagctctatctgctgctgtaacatgcacaattttggctgctgcaggtcctcaa
cgttctcgtgttctggcgactttgtataaagatgaacgctgctcaaagttgaagatttat
cctatattgcaaaaggtgtatttggagagaattttgagaaaacctgaaatcgatgccttc
gctgaagaactaaaagcccatcagaaagcacttttacctgacaattttactgtgttggat
cgtgcaatgattgagcataatcttttgagtgcaagcaagctttacacaaatataagcttt
gatgagctaggtacattgctgggcattgctcctcagaaggccgagaagatagcgtcaaga
atgatttatgaggatagaatgaggggatctattgatcaggtggaagctgttatacatttt
gaggatgacactgaggagttacaacagtgggatcaacagattgttggcctctgccaagct
ctcaatgatgttcttgatagcatggcgaagaagggcttgtcaattcctgtctga

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