Vitis vinifera (wine grape): 100254180
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Entry
100254180 CDS
T01084
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100254180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vvi04040
]
100254180
Ion channels [BR:
vvi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100254180
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
100254180
NCBI-ProteinID:
XP_002274893
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All DBs
Position
14:complement(join(28144732..28145511,28145973..28146209,28146900..28147011,28147511..28147821,28147976..28148188,28149177..28149638))
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AA seq
704 aa
AA seq
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MNTAILTPASKFRPFRRRPSYAPITSDLNPYHILWRYQILEPDGDIVTYWNHVFLVTSLI
SLFLDPLYFFLPSVGGPACLTSDTSLGIVVTFFRTVSDLFYLLHMVMKFRTAFVAPSSRG
LGRGELVMDAHTIAMRYLKSDFIIDLAATLPLPQIVIWLVIPATKKDRADQTNNTLALIV
LIQYVPRLFLIFPLNRRIIKTTGVVAKTAWAGAAYNLLLYMLASHVLGASWYLLSMGRQH
ACWKAECAKESAAGISFCLPSFLDCKSLELEERQYWMNATRVVANCDARGHDTEFKFGMF
ADAFTNDVASSKFIEKYLYCLWWGLKNLSSYGQTLETSIYIGETTFCIVICIGGLVLFSQ
LIGNMQTYLQSMTVRLEEWRVKRRDTEEWMRHRQLPPALQERVHRFVQYKWLATRGVHEE
SILHWLPLDLRREIQRHLCLGLVRRVPFFAQMDDQLLDAICERLTSSLSTEGTYIFREGD
PVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNPSINLPSSTRT
VRSLCEVEAFALTAEDLKFVASQFRRLHNKKLQHAFRYYSQQWRTWGTCYLQDAWRRYKK
RKLAKELARQESYNYMLIPDQEYNLSDEPSDGNFVVGRDESALTDNPNNVQHLGATILAS
KFAANTRRGVAQEVRVVEPAAPSLKMPRLLKPDEPDFSVGHEDV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagcaattctcacgccggcctccaagttccgccccttccggcgacgaccctcc
tacgcgcccatcacctccgacctcaacccctaccacattctctggcgctaccaaattctc
gagcccgacggcgacatcgtcacttattggaaccacgtcttcctcgtcacctctctcatt
tcccttttcctcgaccctctctacttcttcctcccctccgtcggcggtcctgcctgcctc
accagtgacaccagcctcggcattgttgttaccttcttccgtactgtttccgatctcttt
tacttgctgcatatggtgatgaagtttcggactgctttcgtggctcccagttcgagaggc
cttggtcgcggtgagctggttatggatgctcacacgatcgctatgcgttacttgaagtct
gattttattattgatttagctgccactctaccgcttcctcagattgtcatctggttggta
atacctgcaacaaaaaaagacagagcagatcagaccaacaacactcttgctctcattgta
ctcattcaatatgttcctagactgttccttattttccctttgaatcggcggatcataaaa
actacaggagttgttgctaagactgcttgggcaggagctgcttacaatctccttctttac
atgctagccagtcatgtattaggagcttcttggtatctattgtccatgggccgacagcac
gcctgctggaaagcagagtgtgcaaaagaaagtgcagcaggaatttcattttgtctccct
agttttctggactgtaaaagtttggaactagaagaacggcagtattggatgaatgctact
cgagtagttgctaattgtgatgctagagggcatgatacagaatttaagtttggaatgttt
gcagatgcttttactaatgatgttgcttcatcaaaatttattgagaaatacttgtattgc
ctctggtggggattaaaaaatttaagttcatatggacagactttggaaacaagcatttat
attggcgagacaacattttgcattgttatatgcattgggggtttagttctattttcacag
ttgattggaaacatgcagacctatttgcaatctatgacggtaagacttgaagaatggagg
gttaagcgaagagatacagaggagtggatgaggcaccgtcaattgcctccagctttgcaa
gaacgggtacatcggtttgtgcagtacaaatggcttgcaacaagaggagttcatgaagaa
tcaattttgcattggttgcccctggatctccgtcgtgaaatacaaaggcacctatgtctt
ggccttgtccgccgtgtgcctttctttgcacaaatggatgaccagcttcttgatgccatt
tgcgaacgcctcacctcatccttgagtactgaaggcacctatatctttcgagagggtgat
ccagtaaatgagatgctgtttatcattagaggacaactggagagctccacaaccaatggg
ggaagatcaggattcttcaactccatcacccttagacctggtgacttctgtggcgaggaa
ttactgacatgggccttaatgcctaacccgagcataaacttgccgtcttctactcgaact
gtaaggtctctttgtgaagttgaagcttttgcactaacagctgaagacctcaaatttgtt
gcaagtcagttcaggcgacttcacaacaagaaactccagcatgccttcaggtactattct
caacaatggaggacatggggtacttgctatttacaagatgcttggagaagatataaaaag
agaaagctggcaaaggagttggctagacaagagagctacaactatatgctgatccctgat
caagagtataatctcagtgatgagccatcagatggaaattttgtggttggaagagacgag
agcgcattaacagacaatccaaacaatgttcaacatcttggtgccacgattttagcttca
aaatttgctgcaaatacaagaagaggggttgctcaggaggttcgggtggtagagcctgct
gctcctagcttgaagatgccccggctgctaaagccagatgaacctgatttttctgtaggc
catgaggatgtttag
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