Vitis vinifera (wine grape): 100254678
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Entry
100254678 CDS
T01084
Name
(RefSeq) disease resistance protein SUMM2
KO
K13459
disease resistance protein RPS2
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100254678
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
WHD_DRP
LRR_14
LRR_RPS2
LRR_8
AAA_22
ATPase_2
LRR_4
KAP_NTPase
nSTAND6
AAA_16
DUF7167
nSTAND_NTPase5
AAA
NACHT
AAA_7
NAT10_TcmA_helicase
Laminin_II
AAA_14
Motif
Other DBs
NCBI-GeneID:
100254678
NCBI-ProteinID:
XP_019072684
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Position
19:complement(join(24934558..24935562,24935683..24937221))
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AA seq
847 aa
AA seq
DB search
MDFVSPVLDIASRLWDCTAMRAVYIRELPENLNSLRTAMEDLKNVYEDVKEKVDREEKLQ
KKRTHGVDGWIQSVEAMEKEVNDLLAKGDEEIQKECLGTCCPKNCRASYKIVKMVRGKMD
DVALKKTEGLNFSVVAEPLPSPPVIERPLDKTVGLDSLFDHVCMQLQDDKVGSVGLYGMG
GVGKTTLLTRINNEFLKTRVVFDAVIWVTASRQANVEKVQQVLFNKLEIPKDKWEGSSED
ERKEAIFNVLKTKKFVLLLDDIWEPLDLFAVGIPPVNDGSTSKVVFTTRFSTVCHDMGAK
KGIKVKCLAWEEAFALFQTYVGEDTINSHPHIPKLAEIVVKECDGLPLALITIGRAMAGA
KTPEEWEKKIQMLKNHPAKFPGMENHLFSCLSFSYDSLQDEAVKSCFLYCSLFPEDYEIN
CNDLVQLWIGEGLLDEYGDIKEAKNRGEEIIASLKHACLLESVGREDRWSPATYVKMHDV
IRDMTLWLARQNESKKQNKFVVIDKGELVKAHESFPRGFFTYMPIITVLDLSYLDKLIDL
PMEIGKLFTLQYLNLSYTRIKKIPMELRNLTKLRCLILDGIFKLEIPSQTISGLPSLQLF
SMMHFIDTRRDCRFLLEELEGLKCIEQISISLGSVPSILKLLNSHELQRCVRHLTLQWCE
DMNLLHLLLPYLEKFNAKACSNLEDVTINLEKEVVHSTFPRHQYLYHLSEVKIVSCKNLM
KLTCLIYAPNLKFLWIDNCGSLEEVIEVDQCDVSKIESDFGLFSRLVLLYLLGLPKLRSI
CRWSLLFPSLKVMCVVQCPNLRKLSFDSNIGISKNVEEIGGKQEWWDDLEWEDQTIKHNL
TPYFKPL
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgagcccagtcttggatattgcctctcgcttgtgggattgtactgccatg
cgtgctgtttacattcgtgagctcccagaaaatctcaactctctaagaactgcaatggag
gacctcaagaacgtctatgaagatgtgaaggaaaaggtggaccgtgaagagaaacttcag
aagaaacgtactcatggagtggatggctggatccagagtgtagaagccatggaaaaagaa
gtgaatgatttattggcaaaaggtgatgaagaaatccagaaggaatgtctcggaacatgt
tgtcccaaaaactgccgtgccagctacaagattgtgaagatggtacgtggaaagatggat
gatgtggctttaaagaagacggagggcttaaatttcagtgtggtggctgaacctctgccc
agtcctcccgtgatcgagaggcctttggacaagacggtgggcttagattcattgtttgac
cacgtttgtatgcaactccaggatgacaaagtaggaagtgtcggtttatatggcatgggg
ggtgtgggcaaaaccaccctcttgaccaggatcaacaatgagttcctcaaaacaagggtt
gtgtttgatgcagtgatttgggtgactgcgtccagacaagccaatgtggaaaaggtccag
caagttcttttcaataaattggagattcccaaagataaatgggaaggtagtagtgaggat
gaaaggaaagaagcaatattcaatgtcttgaagacgaagaaatttgtcctcctattggat
gatatatgggagcctcttgatctctttgcagtggggattcctcctgtaaatgatggaagc
acgtccaaggtggtatttactacccgattttcaactgtgtgccatgatatgggagctaag
aagggcattaaagtgaagtgcttagcatgggaggaagcatttgctctgtttcagacatat
gtaggagaagacactataaattctcatccccatataccaaagttggcggagattgttgtc
aaagagtgtgacggcctcccacttgccctcatcaccataggacgagcaatggcaggagca
aaaacacctgaggaatgggagaaaaaaatacaaatgttgaagaatcatccagcaaagttt
ccaggtatggagaatcatttgttttcatgcttgtcattcagttatgatagcctacaggac
gaagcagtcaaatcatgtttcctgtattgctctttatttccggaggactatgaaatcaat
tgtaatgaccttgtacaactatggatcggagagggtttgttagatgaatacggtgacata
aaagaagcaaaaaatagaggagaagaaattattgccagtttaaagcatgcatgcctattg
gagagtgttggtagggaagatagatggtccccagcaacatacgtgaagatgcatgatgtc
atccgtgatatgactttgtggttagctcgtcaaaatgagagtaagaagcaaaacaaattt
gtggttatagataaaggcgaattggttaaggcccatgaatcatttccaagggggttcttc
acatatatgcctattataacagttttggacttgtcataccttgataaattaattgatttg
cccatggaaattggcaaattatttactttacaatatcttaatttgtcttatacaaggata
aaaaagataccaatggagctcaggaatttgacaaaactgaggtgtttgatattagatggt
atattcaaacttgaaattccatctcaaaccatttcaggtcttccatccttgcagttgttc
agtatgatgcattttatagatacacgcagagattgtagattcttattagaggagttagag
gggttgaaatgcattgaacaaatatccattagtcttggtagtgttccttccatcctaaaa
ttattgaactcccatgagttacaaaggtgcgtgagacacttaactctacaatggtgcgag
gatatgaacttactccacctattacttccttatctagagaagtttaatgcaaaggcttgt
tcaaatttggaagatgtgacaatcaatttggagaaggaagtggtccactcaacattccca
aggcatcagtacttgtaccacctttctgaagtaaaaatagtatcgtgtaaaaatttgatg
aaattgacatgtcttatttatgctccaaatcttaagtttctatggattgacaactgtggc
tctttggaagaagtgatagaagttgaccagtgtgatgtttcaaaaattgaatccgacttc
ggcctattttcaagacttgttcttctctatttgttgggtctaccaaagttaaggagtata
tgcagatggagcttgctctttccttccttaaaagtgatgtgtgttgtccaatgtccaaat
ttaaggaaactgtcttttgattccaatatcgggattagtaagaatgtagaggaaatcggt
ggaaaacaagaatggtgggatgatttggagtgggaggaccaaacaattaaacacaacctc
actccatatttcaagcctctatag
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