Vitis vinifera (wine grape): 100254820
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Entry
100254820 CDS
T01084
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100254820
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
100254820
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
100254820
Prokaryotic type
100254820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
100254820
NCBI-ProteinID:
XP_010654642
LinkDB
All DBs
Position
9:complement(join(3693106..3693420,3693775..3694456,3694556..3694959,3695052..3695102,3695206..3695353,3695559..3695827,3695906..3696418,3696526..3696569,3696761..3696815,3696945..3696989,3698180..3698269,3699837..3700217))
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AA seq
998 aa
AA seq
DB search
MPHLTSFRLLYCSPLLSPFKSPFLSFSTLSKSKSPLLNPPSFFTVLSSSSGRYPKLRRHP
HHLRRRNSSSFRETNRRDKGMSTEETESGSVGFNKRRAEGRDKNDRPKTLQLKARKLNPV
NTICYVQILGTGMDTQDTSSSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSR
VCSETAGGLPGLLLTLAGMGDEGMSVNIWGPSDLKYLVDAMRSFIPNAAMVHTRSFGQAL
GSDGAPIPDLREFSDPIVLIDDEVVKISAILLRPSCLKGSQIVTEEPNMLYPSEVGIEGR
RDHLQEPILPHSAGEDSKAGAMVKPGDISVIYVCELPEIKGKFDPQKAVALGLKAGPKYR
ELQLGKSVVSDRKNIMVHPSDVMGPSIPGPLVLLVDCPTESYLQDLLSVESLSSYYAGSS
SNPPESAKTVNCVIHLSPASVVRAPNYQVWMKRFGAAQHIMAGHEMKNVEIPILKSSARI
AARLNYLCPRFFPAPGFWSLRHLNHSIPELIASSEGSVTKLCESVAAENLLKFHLRPYAQ
LGLDRSGIPSLSSPSEIIDDLVSEIPEVVDAAQEVGQFWNGFGEAKGEITPMHDDKVMIE
EPWLNWNTLPGCLENITREDMEIVLLGTGSSQPSKYRNVTSIYINLFSKGSLLLDCGEGT
LGQLKRRFSVEGADNAVRGLRCIWISHIHADHHAGLARILTLRRDLLKGVPHEPLLVIGP
RQLKRYLDAYQKLEDLDMQFLDCRHTTEVSLNAFECSFETNKEHSSPEGPVSFEDVNNRN
TVELMNQNIDSSLFAKGSRMQSYWKRPGSPVDHSVAFPILKNLKKVLCEAGLEALISFPV
VHCPQAFGVVLKASERINSVGKVIPGWKIVYSGDTRPCPELIEAARGATVLIHEATFEEG
MVDEAIARNHSTTNEAIEVGNSAGAYRIILTHFSQRYPKIPVFDDAHMHKTCIAFDLMSV
NMADLPVLPKVLPYLKLLFRNEMTVDELDDVISAGLAS
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgccccatctcacaagcttccgcctcctgtactgctctcctctcctttctccatttaaa
tccccatttctctctttctccaccctctccaaatccaagtcccctcttctcaatcctcct
tcattcttcactgtcctctcttcttcgtctggaaggtatcctaaactccgtcgtcacccc
caccatctgaggagaaggaatagcagttctttcagggagactaataggagagacaaaggt
atgtcaacggaggagactgagtctgggtctgttgggtttaacaagaggagggctgagggg
agagacaagaatgacaggcccaagacccttcagttgaaagctcggaaactcaatcctgtc
aataccatatgctatgttcagattctggggactgggatggatacacaagatacttcgtct
tctgtcttgcttttctttgataaacaaagatttattttcaatgctggagagggcttgcaa
cgtttctgcacagagcataagattaagttgtcaaagattgatcacatatttctgtctcgt
gtctgctctgaaacggctggtggacttccagggcttcttttgactttggctggcatggga
gatgaaggaatgtctgtcaatatttggggtccctcagatcttaaatatttagttgatgca
atgagatcctttatcccaaatgctgccatggtccatactcgtagctttgggcaagctctt
ggttctgatggtgctcctattcctgatcttagggagttttcagatcccattgttctcatt
gatgatgaagttgtgaaaatatcagccattctcttgcgaccaagttgcctgaaaggatct
cagattgtgacagaggaacccaacatgctatatccttctgaagtaggcatagaagggaga
agggatcatcttcaggaaccaattttaccacattcagcaggtgaagacagcaaagctggt
gctatggtgaagcctggtgatatttctgtaatttatgtttgtgaattgcctgagattaaa
gggaaatttgaccctcaaaaagctgtggctcttggactgaaagctgggccaaaataccgt
gaattacagcttgggaaatcagtagtgtcagatcgaaaaaatatcatggttcatccaagt
gatgtgatgggaccttctattcctggtcctcttgtattgcttgtagactgcccaacggaa
tcatatctacaggaccttttatccgtggaatccctcagtagttattatgctggttcgtca
agcaacccaccagagagtgccaaaacagtgaattgtgtaattcacttaagtcctgcatct
gttgtaagggctcccaattaccaagtgtggatgaagagatttggtgctgcccaacatatc
atggctggacatgaaatgaagaatgtggaaattccgattctaaaatctagtgcaagaatt
gcagcacgacttaactacctttgtcctcggttctttccagccccaggtttttggtctctt
cggcatcttaaccactcaattccagaattgattgcttcaagtgagggttctgttacaaag
ctttgtgaaagcgttgctgctgaaaatcttctaaagttccatttgcgcccatatgcacag
cttggtttggatagatctggtataccgagtttgagctctccctcagaaataattgatgac
ttagtttcagagatcccagaggttgtagatgctgcccaagaagtaggccaattttggaat
gggtttggagaagcaaaaggggagataactcccatgcatgatgataaagttatgattgaa
gaaccatggttgaattggaatactcttcctggttgtttggagaatataacaagagaagac
atggagattgttcttctagggactggttcttcccagccatctaaatacagaaatgttact
tctatttatattaatcttttctcaaagggaagtttgctcctagattgcggtgaaggaacc
ctgggacaactgaaacgaagatttagtgtagagggtgctgacaatgctgtgaggggttta
agatgtatttggatttctcatattcatgctgatcaccatgcgggtctggcaagaatactt
actttgcgacgtgatttgttgaagggagtacctcatgaacctttgcttgttattgggcca
aggcagcttaagagatatctagatgcataccaaaaacttgaagatctagatatgcagttc
cttgattgcaggcacaccacagaagtttcactgaatgctttcgagtgcagttttgaaaca
aacaaggaacactcttctccagaaggtccagtcagttttgaggatgtaaacaatagaaat
acagttgagttaatgaatcaaaatattgattcctctttatttgctaaaggaagtcgtatg
cagagctattggaagagaccagggagtcctgttgaccatagcgtggctttcccaatccta
aagaacttgaagaaagtgctctgtgaagcaggtttggaggctttgatcagctttcctgtt
gtgcactgtccccaggcattcggtgttgtcttgaaagcatcagagagaatcaatagtgtt
ggaaaagttataccagggtggaagattgtgtactctggtgacactaggccctgcccagaa
ctaatagaagcagctcgtggagcaacagttcttatacacgaggcaacttttgaggagggg
atggtggatgaggcaatagcaagaaaccacagcacaacaaatgaagcaatcgaagttggg
aactctgctggcgcataccggatcatccttacccacttcagccaaagatacccaaaaatt
ccagtttttgatgatgcccatatgcacaaaacatgcattgccttcgacctgatgagtgtt
aacatggcagatttgcctgtcctcccaaaagttcttccataccttaaactcctctttagg
aatgagatgactgttgacgaactggatgatgtaatttctgcaggtttggcctcttaa
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