KEGG   Vitis vinifera (wine grape): 100254930
Entry
100254930         CDS       T01084                                 
Name
(RefSeq) CLIP-associated protein isoform X1
  KO
K16578  CLIP-associating protein 1/2
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100254930
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vvi04812]
    100254930
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     100254930
Cytoskeleton proteins [BR:vvi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      100254930
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG XMAP215_CLASP_TOG HEAT HEAT_2 Vac14_Fab1_bd HEAT_EZ PDS5 Adaptin_N UTP20_C Tti2 Cnd1 Maestro_HEAT MMS19_C Tra1_ring Dopey_N V-ATPase_H_N Cohesin_HEAT DUF3385 Npa1 SEN1_N
Other DBs
NCBI-GeneID: 100254930
NCBI-ProteinID: XP_002265367
LinkDB
Position
7:join(8736844..8737176,8740421..8740576,8740685..8740747,8750758..8750826,8751031..8751196,8752052..8752213,8764380..8764477,8765571..8765645,8765721..8765789,8765872..8765957,8766042..8766159,8767701..8767799,8767887..8768238,8768429..8770221,8770376..8770477,8772226..8772330,8772494..8772568,8772652..8772720,8772885..8772953,8777968..8778069,8780729..8780890)
AA seq 1440 aa
MEEALELARAKDTKERMAGVERLHHLLESSRKALSSAEVTSLVDCCLDLLKDNNFRVSQG
SLQALASAAVLSGDHFKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWTHKSWRVREEFARTVTSAISLFASTELPLQRVILPPILQMLNDSNHGVREAAI
LCIEEMYTQAGPQFRDELQRHHLPTSMLRDINIRLERIEPKIRSSDGLVGNYGAVEVKPV
GLNPKKSSPKAKNSTREMSLFGAENDITEKPIDPIKVYSEKELVREIEKIASTLVPEKDW
SIRIAAMQRVEGLVSGGAADYPGFRGLLKQLVGPLSIQLSDRRSSIVKQTCHLLIFLSKE
LLGDFESCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPKIADCAKNDRN
AVLRARCCEYSLLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRLTARMCYRMFAKT
WPERSRRLFVCFDPVIQRIINEEDGGMHRRHASPSLREKSSQISFTPQTSAPHLPGYGTS
AIVAMDRSSSLPSGTSISSGLLLSQAKSVGKGTERSLESVLQASKQKVTAIESMLRGLEL
SDKHNSSLRSSSLDLGVDPPSSRDPPFPLAVPASNQLTNTSMVESNASSIVKGSNRNGGM
ALSDIITQIQASKDPGKLSYRSNMTSEPLSAFSSYSAKRVSERLQERGSLEDNSEIREAR
RYMNQQSDRQYSDTPYKDVNFRDNSYIPNFQRPLLRKNVAGRMSAGRRRSFDDNQFSLGD
MSSYEDGPTSLNDALGEGLSPSSDWSARVAAFNYLRSLLHQGPKGVQEIMQSFEKVMKLF
FQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTL
EIVSKTYGIDSLLPALLRSLDEQRSPKAKLAVIEFSISSFNKHALNSEGSGNSGILKLWL
AKLTPLAHDKNTKLKEAAITCIISVYSHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRI
EVDLMNFLQSKKERQRPKSSYDPSDVVGTSSEEGYIGASKKNHFLGRYSAGSIDSDGGRK
WSSAQESTLITDCVGQATSDEAQEHMYQNLETNSNTEGLSSKTKDLTYMVNSMGENIGSW
SSRLDNVDSSVNFETSTPRPDINGLMSSGHTGITEGFGQDNEARPELDHNHSKAVKINSA
TETGPSIPQILHLICNGNDEKPTASKRGALQQLIEASVADDQAIWTKYFNQILTAILEIL
DDSDSSIRELALSLIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVPKVSNEAEHCLTIVL
SQYDPFRCLSVIIPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQLPSFLPALFDAFGN
QSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGATIDANAD
NT seq 4323 nt   +upstreamnt  +downstreamnt
atggaggaggctctggaactggcacgcgccaaggacacaaaggagcgaatggccggagtt
gagcgcctccaccaccttctagaatcttccagaaaggctctctcctccgccgaagtcacc
tccctcgtcgattgctgcttggatctcctcaaggacaacaactttagggtttctcagggc
tccctccaggctctcgcgtccgccgccgtcctctccggcgaccactttaagttgcatttc
aatgcccttgttcctgctgtcgttgagcgcctcggcgacggtaagcagccagtccgcgat
gcagcgcgccggctcttgctcactctcatggaggtttcatctccaacaatcattgttgaa
agagcaggatcttatgcctggacacacaaaagctggagagttcgagaagagtttgctcgg
actgtcacatcagcaattagcctttttgcatctacggagcttcctcttcagcgggttatt
cttcctcctattttgcagatgttgaatgactcaaatcatggtgttagagaagcagctata
ttatgcattgaggagatgtacacacaggctggacctcagttccgtgatgagcttcagcgt
catcatctacctacatctatgttgagagatattaatatcagactagagaggattgaacca
aaaattcgctcttctgatggacttgtgggaaattatggtgctgttgaggtgaaacctgtc
ggccttaaccccaaaaaaagcagtccaaaggccaagaattcaacacgcgagatgtctctt
tttggagcagaaaatgatatcacggaaaagcctatagacccaattaaagtatactctgaa
aaggagctagtaagggaaattgagaagattgcatctacccttgtaccggaaaaagattgg
tccatccgcattgctgctatgcagagagttgaaggccttgtttctggaggtgctgctgac
taccctggcttccgtggactcctaaagcaacttgttggtcctttgagcatacaattatct
gatcgtaggtccagcattgtgaagcagacttgtcatctgttgatttttttgtcaaaagag
ctcttgggagattttgagtcgtgtgctgagatgttcattccagtccttttcaagcttgtt
gtgattaccgtacttgtaattgcagagtctgctgataactgcataaaaacgatgttgcgg
aactgtaaagttgcccgtgtacttcctaaaatagctgattgtgctaagaatgaccgtaat
gcagtgctacgtgcaaggtgttgtgaatattcactcttgatactagaatattgggctgat
gcaccagaaatacaacgctcagcagacctatatgaagatcttatcaagtgttgtgttgca
gatgcaatgagtgaggtaagactaactgccaggatgtgctacagaatgtttgcaaaaact
tggccagagcgttcccggcgcttatttgtgtgctttgatcctgttattcaaaggataata
aatgaagaagatgggggtatgcatagacggcatgcttctccttcactacgtgagaaaagt
tcacaaatatcatttactcctcagacatctgctcctcatctacctggatatggaacttct
gctattgtagccatggatagaagtagtagtttaccctccgggacatctatctcctctgga
ttgcttctctcacaagccaaatctgttggaaaaggtacagaacgaagtcttgaaagtgtg
ctccaagcaagcaagcagaaagttactgccattgaaagcatgcttagaggtttggaatta
tctgacaagcataattcaagtctccgatcatctagtttggatctaggagttgaccctcca
tcatctcgtgatcctccatttcctcttgctgttccagcatcaaatcaacttacaaacact
tcgatggtagaatcaaatgcttctagtattgttaaagggagtaatcgcaatggtggcatg
gctttatctgacatcatcactcaaattcaagcttccaaggatccgggaaaattgtcatat
cgaagtaacatgacaagtgagccactgtcagctttttcatcatactcagctaagagagtt
tctgaaagactacaagaaagaggttcccttgaagacaacagtgaaatcagagaggctagg
cgatatatgaaccaacaaagtgataggcaatactctgacacgccctacaaggatgtgaat
tttagggataatagttacattcccaatttccagaggccccttctaagaaagaatgttgct
ggtcggatgtctgcaggaaggaggaggagttttgatgataatcagttttcacttggagac
atgtcaagctatgaagatggtccaacatctcttaatgatgctcttggcgagggactcagt
ccaagttctgactggtctgctagggttgctgcctttaattatctccggtcattgttgcat
caaggcccaaaaggtgttcaagaaattatgcagagttttgagaaagtaatgaagttgttt
ttccagcacttggatgatccccaccataaagttgcacaggcagcactttcaacacttgca
gatattattccatcttgccgaaaaccctttgaaagttatatggagaggatattgccacat
gttttctcacggttaattgatccaaaagagttagttaggcaaccttgctcaacaactttg
gaaatcgtcagcaaaacttatggcatagattctcttctacctgctttgcttcgttcacta
gatgagcagcgatcaccaaaggcaaaattggctgtcatcgagttttctattagttcattc
aacaagcatgcattaaattctgaaggctctggtaatagtggcatcctaaagttatggctt
gctaaattaacccccttagcccatgataaaaatacaaaactgaaggaagcagctattacg
tgcattatctcagtttactcacactttgattcaatagctgtccttaactttattcttagt
ttatcagttgaagaacaaaattccctgagacgagcccttaagcagtacactcctcgtata
gaagtggacctaatgaattttttgcagagcaagaaagaacgccagcgtcctaaatcttct
tatgacccatctgatgttgttggaacatcttctgaagaaggatacattggagcatcaaag
aaaaatcatttcttgggaagatattctgctggctccattgacagtgatggtggcaggaaa
tggagttcagcacaagaatcaaccctgattacagattgtgttggccaagcaacttctgat
gaagctcaagagcacatgtatcagaatctggagactaattctaacactgagggtcttagt
tccaaaaccaaggatttgacttacatggtcaattccatgggtgaaaacataggatcctgg
tccagccggctggacaatgtggacagtagtgtaaattttgagacttctactccgcgcccg
gacattaatggtttgatgagctcaggtcacacggggatcacagaaggctttggccaagat
aatgaagctcgacctgagttggaccataatcattcaaaagcagtgaagatcaactctgct
acagaaacaggacccagcatccctcaaattcttcatttgatttgcaatggaaatgatgaa
aaacctacagcaagcaagcgtggtgcccttcagcaattaattgaagcttctgtggctgat
gatcaagccatttggaccaagtacttcaatcagattttgacagccatacttgagattttg
gatgattctgattcttcaatccgggaacttgctctttcattgatagttgaaatgctaaaa
aatcagaaaggctccatggaagattcagttgagatcgtaattgaaaaattgcttcatgtt
gctaaggacattgttccaaaggtttcaaatgaagcagaacattgcttgactattgtgtta
tctcagtatgatccattcagatgtttaagtgttattatcccactattggtgactgaagat
gagaaaactctggttacttgcataaattgtttgacaaagcttgttggtcggctctcacaa
gaggaagtcatggcacaattgccttcctttttgcctgctctttttgatgcatttgggaat
cagagtgcagatgttcgtaagactgttgtattctgtctagtggacatctatatcatgctt
gggaaagcttttttgccatacctggaggggcttaacagcacacaattgcggttggtgacg
atttatgctaatcgaatctcacaagcaaggacaggtgccaccatagatgcaaatgctgat
tag

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