Vitis vinifera (wine grape): 100255023
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Entry
100255023 CDS
T01084
Name
(RefSeq) polygalacturonase QRT2-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Module
vvi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100255023
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100255023
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
GFP
Ig_TMEM132_4th
Motif
Other DBs
NCBI-GeneID:
100255023
NCBI-ProteinID:
XP_019079762
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All DBs
Position
13:complement(join(27981064..27981100,27981453..27981534,27981612..27981819,27982379..27982510,27982595..27982924))
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AA seq
262 aa
AA seq
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MLPQSIFLSLFLTLISSPLCSSSFQDDPLGNFLEQTPGYDPSAYPSFFGTVDKDRADDFG
VSFTNLQMEYEPEIVESMRYDHLGTPATSQGEVNVENFGAEGDGETDDTEAFKKAWDETC
SSNTAVLVVPENKKCHVKPITFSGPCKSDSVTLKEVSFIQCNDLKVYGLNVQNAQEMHVS
FEQSVNVQAFNIRVTSPGTSPNTDGIHVTRSENVQIIKPVIQAGDDCISIVNGSKNIEAI
DVTCGPGHGISIGSLGGGKSEA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcttccacaaagcatttttctctctcttttcctcactttgatctcttctcctttgtgc
tctagcagtttccaggatgatcctctaggtaattttcttgagcaaacacctggttatgat
ccaagtgcctacccctcattttttggcactgttgataaagaccgggctgatgactttggg
gtgagtttcacgaacctgcagatggagtatgagcctgaaatcgtagaatccatgaggtat
gatcatctgggtactcctgcaacttcacagggagaggtgaatgtcgaaaattttggagct
gaaggtgatggagaaacagatgataccgaggcattcaagaaagcttgggacgagacttgt
tcttcaaacacagctgtccttgttgtccctgagaataagaagtgtcatgttaagccaatt
acattttcaggcccttgcaaatctgattctgtcacgttgaaggaagtatccttcatccaa
tgcaacgacttgaaagtgtatggcctcaacgtacagaatgcccaggaaatgcatgttagt
tttgagcaatctgttaatgttcaagcttttaatatcagggtgacttcaccagggacgagc
cccaacactgatggaattcatgtgacacgctcggaaaatgttcagatcattaaacctgtt
atccaagcaggtgatgactgcatctctattgtaaatggatccaagaacattgaagccata
gatgtaacctgtggaccaggtcatggaatcagcattgggagcttaggaggaggaaagtcg
gaagcctag
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