Vitis vinifera (wine grape): 100255247
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Entry
100255247 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100255247
KO
K26109
nuclear exosome regulator NRDE2
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100255247
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100255247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
Motif
Other DBs
NCBI-GeneID:
100255247
NCBI-ProteinID:
XP_010663903
LinkDB
All DBs
Position
17:complement(join(16610596..16610749,16612268..16612489,16626958..16627183,16636262..16636613,16642523..16642633,16647049..16647409,16649667..16649838,16650024..16650669,16666163..16666931,16668212..16668693))
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AA seq
1164 aa
AA seq
DB search
MEKTEEEEEQKSSSLFPLQAASAASLASSSNVPQWLCNTSFNTDLSVVNDAVSSLYNLTA
AQSEDDEPRQQQATPKPSSYDLLQSSESDDGGRDSKREAKKHKKRKRRRYSEEEASAAND
YASRKSGVGAWATRGSKPSVKDYYFDSRGDRDNLAFGCLYRMDVARYKLGNSAKLFQPGF
QALYWWNKMGSILDRDGDLDVLDSKLKTGGRYWSAKHSVLERHKNLKRIRIVAHEKSKIV
IPGDFIPLSEIQTSPVDVIDGSSLGTSTSEESWEDEVLRKTREFNKMSREHPHDEKIWLS
FADFQDRIASMQPQKGARLQTLEKKISILEKATELNPENEELLLCLMKAYQSRDSTDVFI
GRWEKILLQHSGSYMLWKEFLHVVQGEFSRFKVSDMRKLYVHAIQALSAACSKQYRQVHQ
TAKSPTSDPAVIELELGLVDIFLSLCRFEWQAGYQELATALFQAEIEYGLLCPCLFLSEQ
SKQRLFEHFWNGDGARVGEEGALGWSTWLEKEEENRQQVMKEETADENDKGGWTGWSEPL
SKQKEINLEKTSINLENVADNDVDVDVEDLEDKLETKDTEQEEDTEALMKMLGIDVNAEA
NNEVKDTSIWTRWSEEESSRDCNQWMPFHTKSVGPSHMDESPDKQLDEQLLGVILFEDVS
EYLFSLSSGEARISLLFHFIDFFGGKIPEWMCTNNSSWTEKILSLEAVPDFLSEKLRRVN
DVLTKTQTSSCGFSLEVLLGNAHDASRRIDMMKFLRNAILLCLTAFPRNHILEEAVLVAE
DMFLTKMNSCSCSVTPCRGLAKGLLKNDRQDLLLCGVYARREAIFGNIDHARRVFDMALS
SIESLPADLQLNAPLIYFWYAETELSNSSGNSSESLKRAIHILSCLGSGVSYNPFKCQPS
SPQLLRAHQGFKERIRMLRTTWARGIINDSSTALICSAALFEELTTGWVAAVEVLDHAFS
MVLPEKRSQSHQLEFLFNYYLRILQKHHKQTRLSKFLESISLGLQIYPSSPELFTALVEI
SHLYTVPTKLRSILDDFSNKKPSVMVWLFAVSYELIRGGSQHRIHGLFERALSNDRLRHS
VLLWRCYIAYEIDIASNPSAARRVFFRAIHACPWSKKLWLDGFLKLKSVLSAKEMSDLQE
VMRDKELNVRTDIYEILLQDDVGP
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacagaagaagaagaagaacaaaaaagctcctctctgtttcctctccaagcc
gcttcagctgcctcactcgcaagcagctcaaacgtccctcaatggctctgcaacaccagc
ttcaacaccgacctgtccgtcgtaaacgacgccgtttcatccctctacaacctcaccgcc
gcccaatccgaagacgatgagccacgacaacagcaagcgacgcccaagccttcttcctac
gacttgctgcaatcttcagaatccgatgatggaggtcgcgactccaagagggaagcgaag
aaacataagaagcggaagaggaggaggtacagtgaagaagaagcttctgccgccaacgat
tatgcctcgaggaaatctggcgttggagcttgggcaactcggggttcgaagccttctgtc
aaagattattacttcgattctagaggtgatcgtgataatttggccttcggatgtctctac
agaatggatgttgcacggtacaagcttggcaattctgcaaaactctttcagcctggtttt
caagctttgtactggtggaataaaatgggttcaatcttggatagagacggtgatcttgat
gtgttagacagtaaacttaaaaccggtgggcggtactggtctgcaaagcactctgttcta
gagcgccataagaacctcaagcgcattcgaattgttgcacatgaaaagtccaagatagtg
attcccggtgacttcattcctttatctgaaattcaaacatctcctgtagatgttattgat
ggatcatctctaggaacttcaacaagtgaagaatcgtgggaagatgaggtattacgcaaa
acacgtgagttcaacaagatgtcgagggagcatccacatgatgaaaaaatttggttatct
ttcgcagactttcaagataggattgcaagtatgcaaccacaaaaaggtgctcgtttgcag
actctagagaagaaaattagtatactggagaaggcaactgagcttaacccggaaaacgaa
gaattgctgctttgtcttatgaaggcttatcagagcagagacagcactgatgtctttata
ggtagatgggaaaagatactcttgcaacattctgggagttacatgttgtggaaagagttt
ctgcatgttgttcaaggggaattctccagattcaaggtttctgacatgagaaaattgtat
gtacatgcaatccaagctctctctgccgcatgcagcaagcagtataggcaggttcaccaa
actgctaaaagtcctacctcggatcctgctgttattgagctagaacttggtttggtagac
atatttctgagcctttgccggtttgagtggcaggctggctatcaggagttggctactgct
ctatttcaagctgaaattgaatatggtttgttatgtccttgtctatttctttctgagcag
agtaaacaaagattatttgagcatttttggaatggtgatggtgcaagagttggagaagaa
ggggccctgggttggtccacatggttggaaaaggaggaggaaaacagacaacaggttatg
aaagaggagactgcggatgaaaacgacaaaggtgggtggacaggttggtcagaaccattg
tcaaaacagaaggaaataaatctggaaaaaaccagtataaatctggaaaatgtagctgac
aatgatgtggatgtggatgtggaggatcttgaagacaaattagagaccaaagacacagag
caggaagaagacacagaagctttgatgaaaatgctgggcattgatgtcaatgctgaagcc
aataatgaggttaaagacacttcaatctggactagatggtcagaagaagagtcatcaagg
gactgcaatcagtggatgcctttccataccaaatctgttgggccttctcatatggatgaa
tctcctgataaacaattggatgagcaacttttgggagtcatattatttgaagatgtcagt
gaatacctgttctctttaagctcaggagaggctcgcatatctcttctattccacttcatt
gatttttttggtggaaagatacctgaatggatgtgcacaaacaactcaagttggactgag
aaaatcctgagcctggaggcagtgccagatttcctctcagaaaaattgagaagggttaat
gatgttttaaccaaaactcaaaccagctcgtgtgggttcagtttggaagttctgctgggc
aatgcacatgatgcttctaggaggattgatatgatgaaatttcttcgcaatgctatctta
ctttgtttaactgcttttccacgtaaccacattttggaggaagctgttcttgttgctgaa
gatatgtttcttacaaaaatgaattcttgtagctgttcagttaccccatgccgaggttta
gcaaagggcctcttaaaaaatgatcgacaggatctgttgctatgtggagtttatgcacga
agagaggccatttttgggaatattgatcatgcaagaagggtgtttgacatggcattatca
tctattgagagccttccagcggatcttcagttgaatgcacctcttatatatttctggtat
gctgagacagagctttccaacagttctggcaacagctcagagtcattgaagcgggcaata
cacatcctatcctgtttgggaagtggtgtttcatataatccatttaaatgtcagccatca
agtccgcaactccttagagcccaccaagggttcaaagaacgaatcaggatgctgcgaaca
acatgggcacgtggcattataaatgatagttctactgctctcatttgttcagctgctttg
tttgaagagttgactactggatgggttgctgccgttgaagttttagatcatgctttttcc
atggttcttccagagaaaagaagccaaagtcatcaacttgaatttctgttcaactattat
cttcggatccttcagaaacaccataagcaaacaagactatcaaaattcttggagtccatc
tcgttgggtttgcaaatatacccttccagcccagaactttttactgctttagtggagatt
agccatctatatactgtccccactaaactaaggtcaatattggatgacttttctaacaaa
aaaccatctgtgatggtttggctctttgcagtgtcatatgaattgatcagaggtggctcc
cagcatagaattcatggattgtttgaaagagcattgtcaaatgataggttgcgccactca
gtactactctggcgttgctacattgcatacgagattgatatagcaagcaatccttctgca
gctcgacgagtttttttccgtgctatccatgcctgtccatggtccaagaagctatggctt
gatggatttctgaagctgaagagcgttttaagtgcaaaagagatgtcagatctgcaggaa
gtaatgagggataaggaattgaatgtgaggacggacatctatgagattcttctgcaagat
gatgtgggaccctga
DBGET
integrated database retrieval system
