Vitis vinifera (wine grape): 100255339
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Entry
100255339 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100255339
KO
K24741
WD repeat-containing protein 20
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vvi04990
]
100255339
Domain-containing proteins not elsewhere classified [BR:
vvi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100255339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_Nup120_160
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Cytochrom_D1
Beta-prop_DCAF12
Beta-prop_Vps41
Ge1_WD40
eIF2A
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
100255339
NCBI-ProteinID:
XP_002285063
UniProt:
D7SKW7
LinkDB
All DBs
Position
6:complement(join(3842911..3843306,3844516..3844608,3844694..3844799,3844992..3845079,3845162..3845258,3847636..3847719,3847807..3847894,3849240..3849333,3849418..3849526,3849617..3849928,3850367..3850546))
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AA seq
548 aa
AA seq
DB search
MINSSNINGGMSSPSSSSVNPRSPGLKTYFKTPEGRYKLHYEKTHPSSLLQYPHGKSVTQ
VTLAYLKEKQAQLAPTPSSSMSASSGVRFAAARFLGGGNGGRTLSFVGGNGASKSFTGTS
RSSSLGGLSNCNSMLTSNYDGKGTYLIFNLGDTIYISDFNSQDKDPIKAIHFSNSNPVCH
AFDAEAKDGHDLLIGLNSGDVYSVSLRQQLQDFGKKLVGAQHYNKDGSVSTSRCTSIAWI
PQGDGAFAVAHSDGNLYVYEKGKDGTGDSSFPVIKDQTQFTVAHARSSKSNPVARWHICQ
GSINSIAFSSDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSLDGKYILTG
GEDDLVQVWSMEDRKVVAWGEGHSSWVSGVAFDSYWSSPSSDGTGESVMYRFGSVGQDTQ
LLLWDLSMEEIVVPLRRCPPGGSPTFSSGSQSSHWDSISPVGTLQPAPSMQDVPKLSPVV
AHRVHSEPLSGLIFTQESILTACREGHVKIWMRPRSSESPPSNSEGLLSTSSKEKLLMPG
KVGGSSFK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacagcagcaacatcaacggtgggatgtcgtcgccgtcatcgtcgtctgtcaac
cctcgttcgccgggccttaagacctacttcaaaacgcccgagggccgctacaagctccat
tacgagaagactcatccctccagtcttcttcaataccctcatggaaaatccgtcactcag
gtaacccttgcgtatctgaaggagaagcaggcacagctggcgccaacaccaagctcgagt
atgagtgcctccagtggagtgagatttgcagcggccaggttcttagggggaggtaatggt
ggtcgaactcttagtttcgtgggagggaatggcgcaagtaaatcgtttactggaaccagt
aggagcagttcattgggaggtttgagtaattgtaattcaatgcttacttctaattatgat
gggaaagggacatatcttatattcaatttaggggacacaatctatatcagcgattttaat
tcacaggataaggatcctataaaagcaatacattttagcaattcaaaccctgtctgccat
gcatttgatgcagaagctaaagatgggcatgacttgcttattggattgaattctggggat
gtctattcggtctctctgaggcagcaattacaagattttgggaagaaacttgttggtgcc
cagcattataacaaagatggttctgttagtaccagtcgatgtactagcattgcttggatt
cctcaaggcgatggtgcttttgctgttgctcactctgatggaaacttgtacgtgtatgaa
aagggtaaggacggaacaggtgattcttccttcccagttatcaaggatcaaactcagttt
actgttgcacatgcacggtccagtaagagcaatccagttgccagatggcatatctgccaa
ggttcaatcaatagcattgctttctcatctgatgggacatatttggcaactgttggtaga
gatggttatttacgggtatttgactactcaaaagaacaactaatatgtggtggaaaaagt
tattatggcgctcttctgtgttgtgcctggagcttggatggaaaatacattttgactggt
ggtgaagatgatctagttcaagtttggagtatggaagatcgaaaggtagtagcatggggc
gaggggcacagctcatgggtgagtggagtggcttttgactcatattggtcatcaccatct
tcagatggcactggggaaagtgtgatgtaccgatttggttctgttggtcaggacactcag
ttgcttctatgggacctgtcaatggaggagattgtagttccacttcgcaggtgtccccct
ggtggttcccccacattcagcagtggaagccagtcatctcattgggatagcatttctcca
gtgggcactctccaacctgctccaagcatgcaagatgttccaaaactctccccagtagtt
gcccatcgtgtccattctgaacctctatctggcttaatttttacccaggaatctattctc
actgcatgtcgagaagggcatgtgaaaatttggatgagacccaggtcctctgaaagccca
ccgagtaactcagaaggtcttttaagtactagttcaaaggagaagctgctaatgcctggc
aaggttggcggatctagtttcaaataa
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integrated database retrieval system
