Vitis vinifera (wine grape): 100255342
Help
Entry
100255342 CDS
T01084
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100255342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vvi04147
]
100255342
Membrane trafficking [BR:
vvi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100255342
Exosome [BR:
vvi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100255342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
RAG2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
100255342
NCBI-ProteinID:
XP_002275226
UniProt:
F6HBV4
LinkDB
All DBs
Position
9:complement(join(21169182..21169386,21172830..21172915,21174718..21175227,21176727..21178775))
Genome browser
AA seq
949 aa
AA seq
DB search
MERSCSLLIHFDKATPAMANEIKQALESNDVDAKIDAMKKAILMILNGESIPQLFITIIR
YVLPSEDHIIQRLLLLYLETLKKTDSTGRMLPEMILVIQNLRNNLQHPNEYIRGVCLRFL
CRVAEPELIEPLVPSIIGNLEHRHPFVRRNAVLALMSIYGLPHGEQLLDHAPELIQQLLV
SELDASVKRNAFLMLFNCAQFKAVDYVFSNIDRVPDWDEQMQMVVLELIKKVCRTNKDEK
GKYIKIIISLLNSPLTAVIYECANTLMSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSLHRGVVVEMIMDVLRALSSPSLDIRRKTIDIALDLITPKNVDEVVLVLKKEV
VKTQSVELEKNGEYRQMLIQGIHSCAIKFPEVASTVVLLLMDFLGDNNVASAIDVIVFVR
EIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWIIGEYCLSIPEVESGIETIKQCLGE
LPFFTASEEGDAPNALKSSQQVNSITVSSRRPAILADGTYATQSAAIETTLSPQTLVQGS
LALVGNLRSLILSGDFFLGAVVACTLTKLVLRLEDVQELKTEVNKLSTEVLLIMVSMLQL
GRSSYFPHPIDNDSYDRIVLCIRLLCNTGDEIRKIWLQSCRQSFVKMLADKQFRETEEIK
AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKCATGGFTKDGDDVNKLNRILQ
LTGFSDPVYAEAYVTVHHYDIVLDVTIINRTKLTLQNLCLELATMGDLKLVEHPQNYSLA
PRSSKQIKANIKVSSTETGVIFGNIVYETSNVLERNVIVLNDIHIDIMDYISPASCADVA
FRTMWAEFEWENKVAVNTIIEEEKEFLDHIIKSTNMKCLTPLSALDGECGFLAANLYAKS
VFGEDALVNVSIEKQANSKITGFIRIRSKTQGIALSLGDKITLKQKGSS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagagatcgtgcagtctcctcatccacttcgacaaggccacgcccgccatggccaac
gagatcaaacaggccttggaatccaacgacgtcgacgccaaaatcgacgcgatgaagaaa
gccattttgatgatcctcaacggagaatctattccccaactcttcatcaccattatccgc
tacgtcctcccatcggaggaccacatcatccaaaggctcctccttctctatctcgaaacc
ctaaaaaagacagactccaccggccggatgctgccggagatgatcctcgtgattcagaac
ctccgcaacaacctccagcaccccaacgagtacatccgcggcgtctgcctccgcttcctg
tgccgcgtcgccgagcccgagctcatcgagcctctggtaccctcaatcatcggaaacctt
gagcaccgccacccctttgttcggcggaacgcggtgctcgcgcttatgtcgatctatggc
ctccctcatggcgagcagttgctggatcacgctcccgagctgatccagcagctgctggtc
tcggagctggacgcttccgttaagcggaatgcgttcttgatgttgtttaattgtgcacaa
tttaaggctgttgattatgttttcagtaatattgatagggttccggattgggatgagcag
atgcagatggtggtgttggaattgattaagaaggtttgtaggacaaataaggatgaaaag
gggaagtacattaagataattatatctttgttgaactcgcccttgactgcggttatatac
gagtgtgcaaatactctaatgtccttgtcatctgccccgactgccattagggctgcggca
aacacatactgtcagctgttgctgtcacagagtgataacaatgttaagcttattgtgtta
gataggctcaatgagcttaagtctttgcataggggggtcgtggttgagatgattatggat
gtgcttagggccttatcgagtccaagtcttgacattaggaggaaaacaattgatattgcg
cttgatttgataaccccgaagaatgttgatgaggttgtgcttgtgctgaagaaggaggtg
gtgaagacacagagtgttgagcttgagaagaatggggagtataggcaaatgcttatacaa
gggatacattcttgtgcgattaagttcccagaggtggcaagcacggttgttcttcttttg
atggatttcttgggggacaacaatgttgcttctgccatagatgtgattgtttttgtgcgt
gagattattgaaacgaatccaaagttacgggtatcaataataacaaggcttttggacact
ttttaccagatccgtgctgctagggtgtgttcttgtgctctttggatcattggagagtac
tgcctctctattccggaagttgagagtggaattgagacaattaagcagtgtcttggggag
ctcccattcttcacggctagtgaggaaggagatgcacccaatgctctgaagagttctcaa
caggtgaactctattactgtatcttctagacgtcctgctattcttgcagatgggacctat
gccacacagagtgcagccatagaaactaccttgtcaccacaaacccttgttcaaggatca
ttggctttggttggaaacttgagatcattgattctttcaggcgactttttcctcggggca
gttgttgcttgcacactgacaaagcttgttttgcgattggaagatgttcaggaattgaaa
actgaagtgaacaaattatctacagaagtcttattgatcatggtttctatgctgcaactg
ggtcggtcctcgtatttcccacacccaatcgacaatgattcttatgataggattgtcctt
tgtatcagattgctatgtaacactggtgatgagattaggaagatatggctgcagtcttgc
cgacagagttttgttaaaatgctggctgataagcagtttcgtgaaacagaggaaattaaa
gcaaaggctcaaatttcccatgcacagccagatgatcttattgacttctatcatctcaaa
agcaggaagggtatgagccagcttgaactggaagatgaggtgcaagatgatctcaaatgt
gctactggagggttcacaaaggatggagatgatgtaaataaacttaatcgcattcttcag
ctcacaggattcagtgaccctgtctatgctgaagcgtatgtaacagttcatcattatgac
attgtccttgatgttaccatcatcaatcgaaccaagctgaccctccagaatttgtgcttg
gagttggcaaccatgggtgatctcaaacttgtggagcacccacaaaactattcattagct
ccccgatcaagcaagcagattaaggcaaatattaaggtttcttcaactgaaacaggggtc
atatttggtaacattgtttatgagacttcaaatgtgcttgaacgaaatgttattgtcctc
aatgacatccatattgatataatggattacatttctccggcatcctgtgctgatgtggca
tttagaaccatgtgggctgagtttgagtgggaaaacaaggttgctgtaaacactattatt
gaagaagagaaagaatttttggaccatataatcaagtcaactaacatgaagtgccttact
ccactctcggcattagatggggagtgtgggttccttgcagcaaacctatacgcaaagagc
gtatttggagaggatgctttagtaaatgtgagcattgagaaacaagccaatagcaaaata
actggattcatcagaatacgaagtaaaactcaaggaattgctctcagtctcggggataaa
atcactctcaaacagaagggaagcagttga
DBGET
integrated database retrieval system
