Vitis vinifera (wine grape): 100255499
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Entry
100255499 CDS
T01084
Name
(RefSeq) serine/arginine-rich-splicing factor SR34 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100255499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vvi03041
]
100255499
Spliceosome [BR:
vvi03041
]
Common components
Common spliceosomal components
SR proteins
100255499
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
100255499
NCBI-ProteinID:
XP_002265998
UniProt:
A0ABY9C515
LinkDB
All DBs
Position
7:join(3477789..3477875,3478163..3478228,3478305..3478379,3478488..3478596,3478690..3478736,3478862..3478919,3480041..3480090,3480237..3480293,3480401..3480516,3480600..3480692,3482528..3482561,3483085..3483179,3483367..3483370)
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AA seq
296 aa
AA seq
DB search
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED
AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA
YVRVKEYDSSRSFSRSRSRSYSRGKSASRSRSRSYSRSRSQSKSPKAKSSRRSRSRSVSS
RSHSGSKPRSLSGSRSRSRSPLPTRQKRASKSPKKHSPSKSPSRSRSRSPSKSLSR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtgcgagtagaactctttatgttggcaatctccctggtgacattcgagag
agagaagtagaagacctgttttataagtatgggcctatagctcacattgatctgaaaatc
ccccctagaccccctggctatgcatttgttgagtttgaagagtctcgtgatgctgaagat
gctattcgaggtcgtgatggttatgattttgatgggcaccgattgcgggtggaactggca
catggtgggcgtggacattcatcatcaatagatcggcatagtcatagcagtggtcgaggt
ggccggggtggagcatctaggcgctctgaataccgtgtgttagtcactggattaccctct
tctgcttcgtggcaagacttaaaggatcacatgcgccgtgcaggggatgtttgtttctct
caagttttccatgatggtggtggtacagtggggattgtggattacacaaactacgatgac
atgaaatttgcaatcaggaaacttgatgattctgagtttcggaatgcatttagtcgggca
tatgttcgagtgaaggaatatgattcgagccggagcttttctaggagtcgcagtcgatcc
tactcaaggggcaagagcgctagtcgcagccgcagccgaagctatagtcgcagcaggagc
cagagcaagtctccaaaggccaaatcctcccgtcgatcacgttctaggtctgtttcttca
cgttctcactctgggtcaaagccacgctctttgtcaggatctcgatcaagatccagatct
ccattacccactcgtcagaaacgagctagcaaaagcccaaagaagcatagtcccagcaag
agcccgagcagaagccgcagcagaagcccaagcaaaagcctttcccggtga
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