KEGG   Vitis vinifera (wine grape): 100255744
Entry
100255744         CDS       T01084                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100255744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100255744
   03036 Chromosome and associated proteins [BR:vvi03036]
    100255744
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100255744
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     100255744
    COMPASS/SET1 complex (yeast)
     100255744
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_Nup120_160 KNTC1_N Cytochrom_D1 Beta-prop_WDR35_TULP_N VPS11_N
Other DBs
NCBI-GeneID: 100255744
NCBI-ProteinID: XP_019074731
LinkDB
Position
4:complement(join(21290129..21290272,21290839..21290888,21291602..21291686,21291828..21291965,21292106..21292219,21292307..21292406,21292511..21292577,21292656..21292756,21293306..21293406,21293964..21294061,21294169..21294175))
AA seq 334 aa
MAGGQGQSEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESI
RLYDVATGTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK
GHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAI
AFGGYVRLFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFRG
TLLSTYNVKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPPV
IKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggctggagggcagggccaatcagaaagagaagacaaggttgctctagagctcactgaa
gaaatctttcagagcatggaagttggcatggcttttcgtgattatagtggtaggatcagt
tcaatggattttcataggacatcaagttatctagtgactgctagtgacgatgaatccatt
cgcctgtatgatgtcgccactggaacatgtttgaagacaattaatagcaaaaagtatggg
gttgatctggtctgcttcacttctgatcctacaacagttatatactcctcaaaaaatggt
tgggatgaatctttgcggcttctttcattgcatgacaacaagtatttgcgttactttaaa
ggtcaccatgacagggttgtctctcttagcttgtgctctcgaaaagaatgttttatctct
ggctcacttgatcgaactgttttactttgggatcaacgagctgagaagtgtcagggtctt
ttacgtgtgcaaggaaggcctgctacagcttatgatgatcaagggttagtctttgcaatt
gcatttggaggatacgtaagactgtttgatgctcgcaagtatgataagggtccttttgaa
atcttctctgttgggggagatatatctgatgcaaatgttgtcaagttcagtaatgatggg
aggcttatgcttttaactactatggatggacatattcatgtacttgattcattccgtggc
acgcttctatccacatacaatgtcaagccagtttcaagcacttccactttagaagcatcc
ttcagtcccgagggaatgttcgttatatcaggctcaggtgatgggagtgtctatgcatgg
agtgtacggagtggcaaagaagttgcaagctggatgagcactgaaactgaacctcctgtc
ataaaatgggctcctggaagtctgatgtttgtgactggctcttctgaattatcattttgg
attccagacttatctaaattgggagcttatgctggaagaaagtag

DBGET integrated database retrieval system