Vitis vinifera (wine grape): 100255759
Help
Entry
100255759 CDS
T01084
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100255759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100255759
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100255759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
100255759
NCBI-ProteinID:
XP_019072286
LinkDB
All DBs
Position
18:join(12974707..12974957,12976059..12976407,12976496..12976637,12977223..12977593)
Genome browser
AA seq
370 aa
AA seq
DB search
MEMVGQGGEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVI
MASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAV
EIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCR
RLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDL
CGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS
EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR
TASQLSHPAH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgggacaaggaggtgaggagctggagttctgctttgagaggcttgtgatg
ggtggggacggaagaggggggatggacggaggcggtgttggggtcattactgagtggaag
gatgtccctatggagcttctgctgcggattgttgcgctcgtcgatgatcggacagtgatt
atggcttctggggtgtgcagtggatggagagatgctatttgcttgggccttacccatctc
tccctttcttggtgcaaaaacaacatgaacaacttggttctatcgcttgctcccaaattc
acaaaattgcaggctctaacactgcgtcaagataaaccacagctggaggataaagctgtg
gagattattgcaaattattgccatgatctgcaggatttggatctcagtaaaagcttcaag
cttagtgattcctccctttatgccttggctcatggttgtcctaatcttactaaacttaac
atcagtggatgtacggcattcagtgatgctgctcttgcacatctgaccagtttctgcaga
agattaaaaattttaaatctttgtggatgtgggaaagctgcatctaatagggcattgcag
gctattggacggaactgcagtcagctgcaatctttgaatctggggtggtgtgaggatgtg
agtgatgctggagtgatgagtttagcatatggatgccctgatctcagggcgcttgacttg
tgtggttgtgttcatattacagatgagagcgtaattgctttggcaaacaggtgccttcat
ctgagatcccttggcctgtacttctgtcagaacattacagacaaagcaatgtattccctg
gcccagagccgtgtaaagaacaagcatgaaatgtgggaatccatgaagagcaggtacagc
gaggaagggcttatgaatctcaatatcagccagtgcacagccctcacacctcctgctgtt
caagctgtatgtgattcatttcctgcacttcacacttgtccaggaaggcattcgctaatc
ataagtggctgtttgagcttaacatcggtgcattgtgcctgtggtgtccaagcacaccgc
acagccagccagctttcacacccagctcattaa
DBGET
integrated database retrieval system
