Vitis vinifera (wine grape): 100255954
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Entry
100255954 CDS
T01084
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100255954
Enzymes [BR:
vvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
100255954
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100255954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
100255954
NCBI-ProteinID:
XP_003634223
LinkDB
All DBs
Position
17:complement(join(1048948..1049050,1049244..1049485,1049939..1050064,1050451..1050507,1051241..1051306,1051853..1051935,1052156..1052234,1053438..1053525,1053910..1054010,1054319..1054396,1054488..1054531,1054609..1054702))
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AA seq
386 aa
AA seq
DB search
MKRRRDEAAEMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF
TEEFKGRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQ
KEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSA
SKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPL
KGKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRST
KGLSADRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEG
LWLHCIRYCGPDWVYECPHPEWASHD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaggagagatgaggcggcggagatggagattgtgtggcagaccccagcgaac
ccgccggagcgccatgattacatattccgcaatgggaaacgccacgtcagaccttactac
ttcgagttcatctctcatgttaagaatcgttgggcgggaaaaaccatcgtcgatttgttc
accgaagagttcaaaggacggccttatgattattatgttaatgctgtccaatcgggaagg
atacaagttgatggagagatggtgcctgtttcgtacatagtccgatcatcgcaaaagata
agccactttgtacacaggcatgaaccgccagtgttggcgttggatgtctcagttttgcag
aaagaaccagatgttttaaccatttgtaagccagcatctgttccggtgcatccatgtggt
caataccgtaaaaacactgttgtcggcatccttcaggcggagcatggcttggcacctcta
tttccgatccataggctagaccgcctagtttcaggactcctgatcttggccagaagtgct
tctaaggctgacagttttaggcaacagattgaagctgggatggtgcagaaacagtatatt
gcaaaggtcactggggtatttcctgatgatgagcaagttgtcaatgtgaatgtaaattat
aatgctcgggaaggaagaagcacagtagaggttggcaactgttgtggcaatactcccttg
aagggaaagtcagcatgtacaaagtttactaggattagtaccaatggaactcatagcatt
gttttgtgtgaaccaatcactggtcgaactcatcaaattcgagttcatttacaatataca
ggccatccaatagccaatgatatgctctacctctccgaattttctgttgatcgttctact
aaaggattgagtgctgatagagctgcagctaattcaggctgttctctgccatccagttct
cccaaaagttgtgttgacgaatattgtgatgataattccaccgtagatttcagcattgat
cctatgtgtacaaattgtccaaatttgacccctaaaggatatgatgaggatgaagagggt
ttatggttacactgcattagatactgcgggcctgattgggtttatgaatgcccacatcca
gagtgggcatcgcatgactaa
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