KEGG   Vitis vinifera (wine grape): 100256014
Entry
100256014         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100256014
  KO
K14315  nucleoporin NDC1
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100256014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100256014
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100256014
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 100256014
NCBI-ProteinID: XP_002267109
UniProt: D7TY85
LinkDB
Position
17:complement(join(16082058..16082534,16086252..16086635,16097757..16097981,16105734..16106240))
AA seq 530 aa
MKSTTDIVKKRFLGFLIWQSVHSTIIFILFTTTLSQNGIVSLPSLLTCLSFLTFHLSLLL
FSASLSFISSPYYDRPSSPYDLALGLLRFLFSGQSQPHGFLRRARVFLGLFGFLLEAALA
GTVALVSLCKSESCGGVAVVGLRGFGFGLVYGIYYVFKRRWVLEFPIIQRPLFFSFKMGL
PSAIGQAVKLSAAAYIFSGVLILFLQDQFGSHIKMGNFILEQIIFYVGIFSVCLCWELSH
HLHQVMHTKRYIFAPPKGSAAAETNPSEPLLAALEESTPKSLPRYLAYLDLCMVCDNNVD
SWRRAAFFEETGETYKKVVAVCLRPLEHLASNFAEGLESSSVDKTYQQSSQLQLPTVSER
DSRFSEPFSNIQLCAWCSWAVASLTARSHKEDRFGVAQLSGSNAAVISTLLSCLLAVETF
LGKKTSLQSPNALMGPAGIKWATVTTARSDAATSVVGKKRGFPLHSQAYAIADVLRTSIY
CIVSVFHEEMLTGAKAGLLEKDWIIGGKPLYGTRELLLQKLHLFLDFRAC
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgaaatcaacgacggacatagtgaagaaacgcttcctagggtttctcatatggcaatca
gtccactctactatcatcttcatcctcttcacaaccactctctctcaaaatggcatcgtt
tcactaccttccctcctcacctgcctttccttcctcaccttccacctctccctcctactc
ttctccgcctccctctccttcatctcctctccctactacgaccgtccctcttccccttac
gacctcgccctcggcctcctccgctttctcttctccggccagtctcagccccatggcttt
ctccgccgggccagggttttcctgggtctgttcgggtttttgctggaggcggcactggcc
ggcacggtggcgctggtgtctctgtgcaagtctgagtcgtgtggtggagtggcggtggtg
gggttgaggggttttggatttggcttggtttatgggatttattatgtgttcaagcggcgc
tgggttttggagtttcctatcattcagcgtccccttttctttagcttcaaaatgggtctc
ccttcagctattggacaagctgtaaagctttctgctgcagcatacatattttcgggtgtg
ctgatactatttctgcaagatcagtttgggagtcatattaaaatgggaaatttcattctt
gaacagatcatattttatgttggaattttttcagtgtgtctctgttgggaattaagtcac
catctgcatcaggtgatgcatacaaagaggtatatatttgcaccaccaaaaggatcagcg
gcagcagaaacaaatccaagtgaacctctcttggcagctctagaggagagcactccaaaa
tctcttcctcggtatcttgcatatcttgatctgtgtatggtttgtgacaataatgttgat
agctggcgccgagctgccttctttgaagaaactggtgaaacttacaaaaaagttgtagct
gtgtgcctgaggcctctggaacatcttgcatctaattttgctgaaggcttggaaagttct
tctgttgataaaacttaccaacaatccagtcagttacagttgccaactgtctcagaacga
gactcaaggttctctgaaccatttagcaacatccagctatgtgcatggtgttcctgggca
gttgcctcacttactgctcgttcacacaaggaggataggtttggggttgctcaactttcc
ggcagtaatgctgctgttatatcaaccctgttatcttgcctgcttgctgttgaaacgttc
ctgggaaagaagaccagcttgcagtcccccaatgctctgatgggaccggctggtatcaaa
tgggccacagtgaccacagcaagaagtgacgcggcaaccagtgttgtgggtaaaaagaga
ggtttcccactacactcacaagcttatgccattgctgatgttttaagaacttcaatctac
tgcattgtctctgtttttcatgaggaaatgttgactggcgctaaagcaggactacttgag
aaggattggatcatcggtggcaaacctctttatggaacccgcgaactccttttgcagaaa
ctgcatcttttcctggatttccgagcttgctag

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