Vitis vinifera (wine grape): 100256050
Help
Entry
100256050 CDS
T01084
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100256050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_2
TPR_8
TPR_1
TPR_19
TPR_7
Motif
Other DBs
NCBI-GeneID:
100256050
NCBI-ProteinID:
XP_002282611
UniProt:
A0ABY9DM96
LinkDB
All DBs
Position
17:join(2374268..2374798,2375758..2376246,2378908..2379123,2382956..2383279,2383420..2383662,2384511..2384732)
Genome browser
AA seq
674 aa
AA seq
DB search
MRRFCYTLLVVLALLPLSTLARPFVLILTPDDLSDTAPPSSESAADSGDTSDWDEFGDSD
ARLDDELDPGSWRPILEPDSGPEPKTEDEAVYYSGVAKMIAAASSGGPRVMEEAASEIEA
AATAGNPLAQSALGFLYETGMMRERNKAKAFMYHYFATDGGNTQSKMVLAYTYSRQDMYD
KAVELYAELAEIAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSRGEEDEDFQILEYQA
QKGNAAAMYKIGIFYYFGLRGLRRDRAKALLWFLKAVEKGEPRSMELLGEIYARGAGVER
NYTKALEWLTLASQRLPSAYNGMGYLYVKGYGVEKKNYTKAKEYFEKAVDHDEAGGHYNL
GVMYLKGVGVKRDVKLACNYFIMAAKEGQPKAFYQLAKMFHTGVGLKRNLPMATALYKLV
AERGPWSSLSRWALESYLKGDVGKAFLLYSRMAELGYEVAQSNAAWILDKYRERSMCIGE
SGFCTDAERLQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTERDYDRAAKAYMHAKSQS
NAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALEIDSAAKLPVTLALTSLWIRKNYASSF
LVDLVDSLPEVYPKVEAWVENVIMEEGNATILTLFVCLLTVLYLRERQRRHVAAAPEAAL
PLLPNEHGVLAAPH
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggttctgctacactcttctcgtcgtacttgcgctcctccctctttctacactc
gcacgcccattcgtcctcatcctcacccccgacgacctcagtgacaccgcaccaccgtcc
tccgaatccgccgcggacagcggcgacacgtcggactgggatgagttcggggactccgac
gccaggctcgacgacgagctcgacccgggctcctggcgcccgatcttggagccggattcg
ggtccggaaccaaagactgaggatgaggcggtgtactactccggcgtggcgaagatgatc
gctgctgctagctctggcggaccgagggtcatggaggaggcggcatcggagattgaagcg
gccgcgacagcggggaacccccttgcgcagtcggcgttagggtttttgtatgagacgggc
atgatgagggagaggaacaaagccaaggcgtttatgtatcattactttgctaccgatggc
ggtaacacgcagtctaagatggttcttgcctacacttactcgcgccaagatatgtatgat
aaagcggttgagctatatgctgaattagcagaaatagctgtgaacagttttttaatttcg
aaggattcaccagtgattgaacctgttaggctccataatggagctgaagagaacaaagag
gccctgaggaagtctagaggggaggaagatgaagacttccagatcttggaataccaggct
caaaaagggaatgcagcagctatgtataaaattgggatattttactactttggattgaga
ggattgaggcgtgatcgtgccaaggcattgttgtggtttctaaaggctgtggagaagggg
gagccaaggtccatggaacttcttggggagatttacgcaaggggagctggtgttgagagg
aactacactaaggcgttggaatggctaacgctcgcatcccaacgactcccttcagcttat
aacgggatggggtatttatatgtgaaaggttacggagtggaaaagaagaactacaccaaa
gcaaaagaatactttgagaaggctgttgatcatgatgaggctggtgggcactataaccta
ggtgtaatgtatctcaaaggagttggagtaaaaagggatgtgaagctagcttgcaattat
tttataatggcagctaaagaagggcagccaaaggcattttaccagttggcaaagatgttc
catactggtgtggggcttaagaggaatcttcctatggctactgcattatacaaactagtt
gcagaacggggaccatggagttccttgtctagatgggcactggagtcatacctaaaaggt
gatgtggggaaggcgttcctcttgtactctaggatggctgagctaggctatgaggtggca
caaagtaatgctgcatggattcttgacaaatatagggaacgtagtatgtgcataggagaa
tctggattttgtacagatgcagaaaggcttcagcgggcacattctttgtggtggcaagct
tctgagcagggtaatgaacatgctgctttgctgatcggggatgcttattactatggtcgg
ggtactgagagagattatgatcgagctgcaaaggcatacatgcatgccaagtcccaatcc
aatgcacaagccatgttcaaccttgggtacatgcatgagcatggacaaggacttccattt
gatcttcatcttgcaaagcgttactatgatcaagccctagagattgattctgctgcaaaa
ttgcctgttacattggctcttacgagcttgtggatacgaaagaactatgccagcagtttc
ctagttgacttggtcgattcactgcctgaagtctatccaaaagtggaagcatgggtggag
aatgtgatcatggaggaaggaaatgcaacaattctcaccctttttgtctgcctactgaca
gtcctttaccttcgtgaacgacaacgtaggcatgtggctgctgctccagaggcagccctg
ccactccttcccaatgagcacggtgtacttgctgcaccccattaa
DBGET
integrated database retrieval system
