Vitis vinifera (wine grape): 100256145
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Entry
100256145 CDS
T01084
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100256145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100256145
03036 Chromosome and associated proteins [BR:
vvi03036
]
100256145
Ubiquitin system [BR:
vvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
100256145
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
100256145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
RMC1_N
Ge1_WD40
CFAP43_N
WDR54
Beta-prop_VPS8
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
100256145
NCBI-ProteinID:
XP_019075498
LinkDB
All DBs
Position
5:complement(join(24241438..24241581,24241668..24242249,24242335..24242613,24242760..24243032,24243403..24243455,24243613..24243658))
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AA seq
458 aa
AA seq
DB search
MADPLSVLLLARLSRGSLNSCPQQVQFLQRWENLDRFIPNRSAMDFDFAHYMLTERGKGK
ENQSVRSQSKEAYLKLLAETFNMNRSRILAFKNKPPTPVKLIPDEFYSSVHQSKPSKPLR
RIPQMQQTPVRTLDAPDIIDDFCLNLMDWGSSNVLALALQNTVYLWDASNGSASELVTVD
DENGSVTSVSWAADGQYIAIGLNSSDVQLWDSTANRLLRTLRGGHQSRVGSLDWKNHILT
TGGMDGQIINNDVRAHSHIVATFRGHRQEVCGLKWSTSGQQLASGGNDNLLHIWDRSMAS
MHSRSQWLHRLEDHTAAVKALAWCPFQRNLLASGGGGSDGCIKFWNTHTGACLNSVDTGS
QVCALLWNKNERELLSSHGFMQNQMTLWMYPSMVKIAELTGHTSRVLFMAQSPDGRIVAT
AAGDETLKFWNAFGTPEVKKAAPKAEHPGPFPHLRRIR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccctttcggttctcctccttgcacgcctctccagagggtctttgaattct
tgccctcaacaggtgcagtttcttcaaagatgggaaaatttggacagattcattccaaac
agatcagcaatggacttcgactttgcccattacatgttgactgaaagggggaaaggcaaa
gagaaccaaagtgttaggtctcaatccaaagaggcctacttgaaactactggctgagaca
ttcaacatgaatcgctctcgcatcctcgcctttaagaacaaaccacctactccagtaaaa
ttgataccagatgaattctattcttctgttcatcaatccaagccctcaaagcctctgcgg
cgtattcctcagatgcaacagactcctgtgaggacattggatgctcctgatattatagat
gatttttgcttgaacttaatggattggggtagcagcaatgttctcgcacttgctcttcaa
aacacggtatatttgtgggatgcttcaaatggttctgcctcagagcttgtcactgttgat
gatgagaatggctctgttacaagtgtgagttgggctgctgatggacaatatattgccatt
ggcttgaacagttctgatgttcagctatgggattctacagctaatcggctgctgaggact
ctgagaggtggccaccaatcacgagttggttctctagattggaaaaaccacatccttaca
actgggggaatggatggtcagatcattaacaatgatgtgagagcgcactcgcacattgtg
gcaacttttagaggacaccgacaagaggtttgtggactgaaatggtctacctctggccaa
cagttagcgagtggaggaaatgacaatttactccacatatgggataggtcgatggcctcc
atgcattcacgttctcagtggcttcacaggcttgaggatcatactgctgcagtaaaagcg
cttgcttggtgcccttttcagcgcaatttgctggcttctggaggaggtgggagtgatggt
tgcataaagttttggaacacccacactggcgcatgcttgaactcagtggacactggctca
caggtctgtgctctgctgtggaacaagaacgagcgtgagttgcttagctcccatggcttt
atgcagaatcaaatgaccctctggatgtatccatcaatggtgaagattgctgagcttact
ggtcatacatccagagttcttttcatggctcagagtccagatgggcgtatagtggcaact
gctgcaggagatgagactctcaagttctggaatgcttttggcacgccagaagtgaaaaag
gctgcaccaaaagcagagcatcctgggccatttcctcatctaaggagaatccgttag
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