KEGG   Vitis vinifera (wine grape): 100256288
Entry
100256288         CDS       T01084                                 
Name
(RefSeq) protein EXPORTIN 1A
  KO
K14290  exportin-1
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
vvi03013  Nucleocytoplasmic transport
vvi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100256288
   03008 Ribosome biogenesis in eukaryotes
    100256288
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100256288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100256288
   03009 Ribosome biogenesis [BR:vvi03009]
    100256288
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100256288
   03036 Chromosome and associated proteins [BR:vvi03036]
    100256288
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100256288
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100256288
  Pre-60S particles
    100256288
Transfer RNA biogenesis [BR:vvi03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100256288
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100256288
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N Adaptin_N mTOR_dom
Other DBs
NCBI-GeneID: 100256288
NCBI-ProteinID: XP_002275630
UniProt: A5BVQ5
LinkDB
Position
16:join(2285952..2286050,2287877..2287993,2289351..2289443,2289572..2289643,2289962..2290069,2290150..2290232,2291161..2291299,2291453..2291521,2291616..2291693,2291898..2291960,2292048..2292092,2292175..2292282,2292373..2292471,2293367..2293570,2294218..2294277,2295202..2295312,2296431..2296528,2296794..2296902,2297292..2297357,2297536..2297634,2297720..2297800,2297931..2298020,2299288..2299373,2299515..2299595,2300264..2300446,2301217..2301283,2301926..2302036,2302249..2302356,2302437..2302574,2302648..2302785,2302858..2302962,2303582..2303704)
AA seq 1076 aa
MAAEKLRDLSQPIDVALLDATVAAFYGTGSKEERTAADQILRELQNNPDMWLQVVHILQS
TQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRRERLYVNK
LNIILVQVLKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPVPSYRNLTLQCLTEVAALNFGDFYNLQYVKMYNIFMVQLQSILPTTTNIPEAYA
HGSSEEQAFIQNLALFFTSFYKSHIRVLESSQENISALLLGLEYLIGISYVDDTEVFKVC
LDYWNSLVLELFEAHHNLDNPAVAANMMGLQIPLIPGMVDGLGSQLLQRRQLYSGPMSKL
RLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLKGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPKFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIIQVGENEPFVSELLSGLPSTIADLEPHQIHTFYESVGHMIQAESDPQKRDEYLQR
LMELPNQKWAEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVATSLGTYFLSQITLIFLD
MLNVYRMYSELISNSIAEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIEDVPRIFEASFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGA
LTEPLWDVSTVAYPYPNNTMFVREYTIKLLSTSFPNMTTSEVTQFVTGLFESRNDLSTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMLDS
NT seq 3231 nt   +upstreamnt  +downstreamnt
atggcggccgagaagcttagggatttgagccagccgattgatgtggcgctgctcgacgct
accgtcgcggccttctacggcactggatctaaggaggagaggacagctgcagaccagatt
ttgagggagctgcaaaacaatccagatatgtggcttcaagtagttcatattctacaaagc
actcagaatctaaacaccaagttctttgccttgcaggtccttgagggtgttattaagtat
aggtggaacgcattgcctgttgaacaacgggatgggatgaagaattacatttctgaagtc
attgtccagctttcaagcaatgaggcctcatttcggcgagagaggctgtatgtcaacaag
ctcaatatcatcttggttcaggttttgaagcatgagtggccagcaagatggcgaagcttc
attcctgatcttgtttcggcagcaaaaactagtgaaacaatttgtgaaaattgcatggct
attttgaaacttctaagtgaggaggtttttgatttctcaaggggagaaatgactcaacag
aagatcaaagagcttaaacaatctctaaacagtgagtttcagctcattcatgagttatgc
ttatatgtactatcagcatctcaaagaactgaacttatacgggcaacgctggctacattg
catgcttttctctcatggattcctttgggctatatttttgaatcaccgctgctggaaacg
ctcctaaaattttttcctgtcccatcatatcggaatctcaccctccagtgtttgacagag
gttgcagcccttaattttggggacttctataaccttcagtatgtgaaaatgtataacata
ttcatggtccagttacagtctattcttccaactactacaaacatacctgaggcttatgca
catggctctagtgaggagcaggcatttattcagaaccttgctctatttttcacctcattt
tataagtctcatattcgagtgctggaatctagtcaagagaacatatctgcactcctactg
ggtcttgagtatctcattggcatctcatatgtggatgacactgaagttttcaaggtttgt
ctggactattggaactccttagttttggagctgttcgaggcacaccataatttagataat
cctgcagtggctgcaaatatgatgggactgcagataccattgatccctggtatggttgat
ggccttggttctcaacttctgcagcggcggcagctttattctggtcctatgtcaaagttg
agattgcttatgatctgtcgtatggctaagcctgaagaagttctgattgttgaagatgaa
aatgggaatattgttcgtgaaactatgaaagacaatgatgtccttgttcagtataagatt
atgagagaaactctgatctatttgtcacaccttgatcatgaggatactgaaaagcagatg
ctgaaaaaattaagtaagcagctgaaaggtgaggattggacatggaataacttaaataca
ttatgctgggcaataggatccatatccggttccatgatggaagaacaggaaaacagattt
ctggtgatggtcatccgtgatttactgaatttatgtgaaatcacaaaaggaaaagataac
aaggccgtcattgcaagcaacatcatgtatgttgttggacaatacccaaaatttctgagg
gcccattggaagttcttgaaaactgttgtgaataagttatttgagttcatgcatgagaca
catcctggagttcaggacatggcctgcgatacattcttgaaaattgtccagaagtgcaaa
cgtaaatttgttattatacaggttggtgaaaatgaaccatttgtatctgaattactatca
ggccttccatcaactattgcagatcttgagcctcaccaaatccataccttttatgaatct
gttggtcatatgatccaagcagaatctgatccccagaagagggatgagtatctgcagagg
ttgatggaactcccaaatcagaaatgggctgaaattattggacaggcacgccaaagtgtt
gatttcctgaaggatcaagatgtgatccggactgtgcttaatatattgcagacaaataca
agtgttgccacatcacttggaacatatttcttatcacaaattacgctgatatttttggac
atgcttaacgtgtacagaatgtacagtgagcttatatcgaatagcattgctgaaggaggg
ccctttgcctctaaaacgtcctatgtaaagcttttgcggtcagttaagagggagactctc
aagctcattgagacatttttggacaaggctgaagatcagccacaaattggaaagcaattt
gttcctccaatgatggatcctgttcttggtgactacgcaaggaatgtacctgatgctagg
gaatcagaagttttgtcactttttgcaacaataataaacaagtacaagggtgcaatgata
gaggatgtgcctcgcatatttgaagccagttttcaatgcacgctggagatgattactaaa
aattttgaagattatccagagcatcgcctaaaattcttctccttacttcgtgcaattgct
acacattgctttcctgctttgattcggttgtcaagccagcaattgaagcttgtaatggac
tcaatcatatgggctttccggcacactgagaggaatattgcagaaacaggtttaaacctt
ttattggagatgttgaagaactttcaggcttctgagttctgtaaccagttctaccgaacg
tacttcttgacaatcgagcaagaaatttttgctgttctgacagatacctttcacaaacct
ggattcaagttgcatgtcttagtactgcagcacctattttgcctggttgagtctggtgca
ttaacagagcctttatgggatgtatctacagttgcttatccatatcctaataacacaatg
tttgttcgtgagtataccataaaactcttgagtacctcgttccccaacatgacgacatct
gaggtgacccaatttgtgactggactatttgagtcgagaaatgacctctcaacatttaaa
aatcacatacgagacttcctcgttcaatcaaaagaattctctgctcaggataacaaagat
ctctatgcagaagaagctgctgctcagagagaaagagagcgacagcggatgcttagtatc
ccagggctcatcgccccaaatgagattcaagacgagatgttggactcatag

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