KEGG T01084: 100256404

Vitis vinifera (wine grape): 100256404

Entry

100256404         CDS       T01084

Name

(RefSeq) probable E3 ubiquitin-protein ligase RHC2A

K11982

E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]

Organism

vvi Vitis vinifera (wine grape)

Brite

KEGG Orthology (KO) [BR:vvi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100256404
   04121 Ubiquitin system [BR:vvi04121]
    100256404
Enzymes [BR:vvi01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100256404
Membrane trafficking [BR:vvi04131]
Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    100256404
Ubiquitin system [BR:vvi04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100256404

SSDB

Motif

Pfam:

DUF1117 Zn_ribbon_19 zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-RING_5 Rad50_zn_hook zf-C3HC4_3 zf-HC5HC2H_2 zf-C3H2C3 zf-Nse

Other DBs

NCBI-GeneID:

100256404

NCBI-ProteinID:

XP_002283100

LinkDB

Position

13:complement(3380529..3381614)

AA seq 361 aa
MSYWCYSCNRFVRVWSHDAIVCPDCDGGFLEEIEEQPRRPHRFPAAAMYMIENRPNSAQN
SHSAVRRIRRGRGDRSPFNPVIVMRGTADEGGGEGGDRGAFDLYYDDGGGSGLRPLPASV
SEFLLGSGFDRLLEQLSQMEINGIGRYEQPPASKAAIEAMPTIEIADAHVNTEHHCAVCK
EPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEERNSPESNEQTPEETVG
LTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERG
GLGRMFRNLLACFGGHGSSSSSSSSESGSRRRSSSSLLTLGSSSRNRRAWALEVNSGIRR
W

NT seq 1086 nt +upstreamnt +downstreamnt
atgtcgtattggtgctatagttgcaatcggttcgttagggtttggagtcacgatgcaatc
gtctgtcccgattgcgatgggggttttctggaggagatcgaggaacagcctcggcgcccc
cacaggtttcctgcggctgcgatgtacatgattgagaatcggcccaattcggctcagaat
tcccattcggcggtccggcgcatccggaggggccgtggtgaccggtcgccgttcaatccg
gtcatcgttatgaggggaacagctgatgagggtggcggcgagggtggagatagaggtgcg
tttgatctttactacgacgacggtggcggttcggggcttaggccgttgccggccagtgtg
tcggagtttttgctgggatcgggttttgaccggcttctcgaacagctttcgcagatggaa
atcaacggaattgggcggtacgagcaacctccggcgtcgaaggcggcgattgaggcgatg
cccacaattgagatcgcggatgctcatgtaaacacagaacatcactgtgctgtatgcaaa
gaacccttcgaattgggcgccgaagctcgcgaaatgccttgtaagcacatatatcactcc
gattgcatcctaccatggctctccctccgcaactcttgtcccgtttgccgacacgaattg
ccctccgaagagcgaaactcgccggaatccaacgagcaaacccccgaggaaaccgtgggt
ttgacgatatggaggcttccgggtggtgggtttgctgtagggaggttttcgggaggcaga
agaggcggcgagcgagagcttccggtagtttatacagaaatggacggtgggtttaacaat
ggcggtgctccgagaagaatttcgtggacgtcgcgaacgaataggaatcaagagaggggc
ggattgggacggatgtttcggaatctgttggcttgctttggggggcatggatcgtcctct
tctagttcgagctcagaatctggaagtagacgtaggagcagtagttccttgttaactttg
ggttcatcttcacggaatcgtagagcgtgggcccttgaagttaacagtggaattaggaga
tggtga

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