KEGG   Vitis vinifera (wine grape): 100256546
Entry
100256546         CDS       T01084                                 
Name
(RefSeq) plant-specific TFIIB-related protein 1
  KO
K03124  transcription initiation factor TFIIB
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100256546
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100256546
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     100256546
 Prokaryotic type
  Archaeal type
    TFB
     100256546
SSDB
Motif
Pfam: TFIIB Cyclin_C HTH_Mga Zn_Ribbon_TF
Other DBs
NCBI-GeneID: 100256546
NCBI-ProteinID: XP_002267728
UniProt: F6GWX8
LinkDB
Position
4:join(19526816..19527457,19532795..19532953,19534256..19535077)
AA seq 540 aa
MRCPYCTAAQGRCGTTGSGRLVTECTSCGRVMEERQSQIHHLFHLRAQDTPLCLVTSDLP
PPPPQQAQTAQEQEDDPFESTGFISAFSTWSLDPCPIFARSCLSFSGHLAELERVLESSS
SSSSSSSSSAAAAASSSSLASSGPAVVVDNLRAYLQIIDVASILGLDYDIADHAFELFRD
CSSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQL
SQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLAC
QLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTAITSG
RSSAPRVDLIEIVSCLDRDKQPESKPSKPNETLETSHQARGKEDTECKGNCQGAHTLGLN
RPTTFWQLPNPFGGSGFRTSGEKNQIVSGGMDLNEGGANPQELEQKLDNGAKAATVSVRA
EQFPGAPPSSGSSITWPFRQPPSSGSSSSYAQLMQSLKVASGFPELKGSGRKGGGQCEDP
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgaggtgcccgtactgcacggcggcgcaggggcggtgcggcaccacggggtcagggcga
ttggtgacggagtgcacctcctgtggacgagtcatggaagagcgccaatcccaaatccac
cacttattccaccttcgagcccaagatacccctctctgcctcgtcacttccgacctccca
ccacctcctcctcagcaagcccagaccgcccaggaacaagaagatgatcctttcgagtcc
accggcttcatctccgccttctccacctggtccctcgacccatgcccaatcttcgcccgc
tcgtgcctttccttctcaggccaccttgctgaactcgagcgtgttctcgaatcatcatca
tcgtcatcatcgtcatcttcttcttctgctgctgcggcagcgtcgtcttcgtctctggcc
tcctctggacctgcggttgtggtcgataatcttagggcttatctgcagatcatagacgtg
gcctccattttggggttggactatgatatagcggaccacgcatttgagctattcagggac
tgttcttcggctacctgtttgaggaatcgcagtgtggaggctcttgccactgctgctctt
gttcaggccattagggaggcccaggagcccagaactcttcaggaaatctcaattgcagcc
aatgtaccccagaaggagatagggaagtacatcaagatactgggagaagctctacaacta
agccagcccattaatagtaattccatatcagtccatatgccaagattttgtacgcttcta
cagctcaacaaatctgctcaggaactggcgacacacattggagaagttgtgatcaacaaa
tgcttctgtactcgaaggaaccccattagcatttctgcagcagctatatacttggcctgc
caactagaagacaagcgcaagacccaggccgagatttgtaaggtgacgggtctaactgag
gtcactcttcgaaaagtttacaaggagctattagagaattgggacgatcttctcccttcc
aattatactccagctgtccctccagagaaagcatttcccacaactgcaattacctctggc
cgttcttcagcacctagagttgatcttatagaaattgtttcttgtctggacagggataag
cagcccgaaagcaaaccaagtaaaccgaacgagaccttggaaacttcccaccaggccaga
ggcaaagaggatactgaatgtaaagggaactgtcaaggagcccatacacttggtttgaac
cggccaacaactttctggcagctcccaaacccatttgggggttctggttttaggacatca
ggggagaagaatcaaattgtgagtggaggaatggacttgaacgagggtggggctaatcct
caagagttggagcagaagttagacaatggcgcaaaggctgcaactgtttctgtgagggct
gagcagtttcctggtgccccgccttcaagtgggagttccataacgtggccatttcggcaa
ccaccttcatcaggatcttcttcttcatatgctcaacttatgcaatcattgaaggtagca
tcaggttttccagagcttaaaggatctggaaggaaaggtggtgggcaatgtgaggatccc
tag

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