KEGG   Vitis vinifera (wine grape): 100256664
Entry
100256664         CDS       T01084                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03420  Nucleotide excision repair
vvi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100256664
  09124 Replication and repair
   03420 Nucleotide excision repair
    100256664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vvi04121]
    100256664
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100256664
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     100256664
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100256664
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100256664
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 100256664
NCBI-ProteinID: XP_002280735
UniProt: F6HLW1
LinkDB
Position
10:join(12550997..12551100,12551978..12552026,12562347..12562406,12562505..12562596,12570297..12570348,12570481..12570543,12570693..12570742,12588011..12588086,12588496..12588705,12588845..12588951,12589105..12589213,12591561..12591761,12591866..12592081,12594277..12594387,12594588..12594863,12595232..12595506,12599013..12599364,12599634..12599918,12600061..12600642)
AA seq 1089 aa
MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SASAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELR
NEWKAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPI
GENPNFSQLAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCAL
GDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSLKYNQSSTEDSEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD
SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTRELQSESGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKV
IKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagcgtgtggaattatgttgttacggctcacaagcccaccaatgttacgcactcctgc
gtcggcaatttcactggccctcaggagctcaacctcatcattgcgaaatgcacccgcatt
gagattcatttgcttacacctcagggtttacagcctatgttggatgtgccaatatatggg
agaatagcaacacttgagctttttcgcccccatggcgaagcacaagattttctattcatc
gcaactgaaagatacaagttttgtgttcttcaatgggatgcagagaattctgaggttatt
acaagagcaatgggagatgtctcagatcgtataggtcgtcctacagacaatggacagatt
ggaattattgatcctgattgcagattaattggacttcatttatatgatggattatttaag
gtgattccgtttgataataaaggacagctgaaggaggcgtttaatattaggcttgaggag
cttcaagttttggatatcaagtttctttatggatgttcaaaaccaactattgttgttctc
taccaggataacaaagatgcacgtcatgttaaaacatatgaggtggctttgaaggataag
gattttgttgagggtccttgggctcagaacaatctagacaatggggctgatttgctaata
ccagtacccccacctctctgtggtgtcctcattattggagaagaaacaattgtatattgc
agtgccagtgcattcaaagcaatcccaatccgaccttcaattacaaaggcctatgggagg
gttgatgctgatggttctagatacttacttggggatcatgcggggcttcttcacctactt
gttataacccatgagaaagaaaaggttactggactgaaaattgagctgttaggggaaact
tctattgcatcaacaatttcatatcttgacaatgcatttgtctatgttggctcaagctat
ggagattcacagctcataaagatacatctacaacctgatgccaaaggttcatatgtggag
gttttagagaggtatgtcaatctgggtccaattgttgacttctgtgtggtagacctggag
aggcaaggccaaggtcaggttgtaacttgctcaggggcttataaagatggttctcttcgc
attgttcgaaatggaataggaatcaatgaacaggcatcagtggaacttcaaggcatcaaa
ggaatgtggtcattgagatcttctactgatgatccacatgacaccttcttggttgtaagc
tttatcagtgagacacgaatattggcgatgaatcttgaagatgagttggaagaaactgag
atagagggtttctgttctcaagtgcagactttgttctgccatgatgctgtttatgatcaa
ctagtacaagtcacttcaagctcagtaagactggttggttctacatctagagagctgcga
aatgaatggaaagctccatcagggtattcagttaatgttgctactgctaatgccacccag
gttttattggccactgggggtggccatctagtttacctggaaattggtgatgggacattg
actgaagtgaaacatgctcaattagagtatgacatctcatgccttgacataaatcccatc
ggcgaaaatcccaactttagtcagttagctgctgttggaatgtggacagatattagtgtt
aggatattttcacttcctgacctgaatctcatcacaaaagagtatttgggtggagagata
atacctcggtccgtacttctgtgttcctttgaagggataccttacttgttgtgtgcactg
ggagatggtcatttgttgaactttttactgaacatgagtactggtgagttaacagatagg
aaaaaggtgtctcttgggacacaacctatcactcttcgaactttctcatccaagaatact
acacatgtatttgctgcatcggataggcctacggtgatttacagcagtaacaagaagcta
ctctacagcaatgttaatttgaaagaagtcagccacatgtgccctttcaattctgctgct
tttccagatagccttgcaattgccaaagaaggtgatcttacaatcggtaccattgatgat
atccagaagcttcacatccgctctatcccacttggggagcatgctcgccgcatctgccat
caggagcagtctcggacctttgccatttgtagtttgaagtataaccaatctagtacagaa
gattctgaaatgcactttatccgtttgttagacgaccaaacctttgagttcatatctact
tatccacttgacacgtttgagtatggttgctctatccttagctgctccttctctgatgat
agtaatgtatattattgcgttgggaccgcatatgttttaccagaggaaaatgagccaacc
aagggccgaatactggtcttcatagttgaggatgggaagctacagttaattgctgagaag
gaaaccaagggggctgtttattctttgaatgccttcaatggtaaactacttgctgctatc
aatcaaaaaattcagttgtacaagtggatgctccgggatgatggtacccgtgaattgcag
tctgaatctggacaccatggacacattcttgccctctatgtacaaacacggggagatttc
attgttgttggtgatctgatgaaatcaatctctttgttaatttataagcatgaggaaggt
gccattgaagagcgagcccgtgactacaatgcaaattggatgtcagctgttgagattctt
gatgatgacatttaccttggtgctgagaataacttcaacatcttcacagtgcgaaagaac
agtgaaggtgctactgatgaggagcggggtcgtcttgaagttgttggtgagtatcatctc
ggagaatttgtcaaccggttccggcatggttcccttgtcatgcgcttgccagattctgat
gtgggtcagataccaactgtaatttttggcactgttaatggcgtaattggggtcatagca
tcacttccacacgatcagtatgtcttcttggagaagcttcaggcaaacttgaggaaggtg
ataaagggtgtaggagggttgagccatgagcagtggaggtcattcaacaatgagaagaaa
actgtagatgctaaaaatttcttggatggagatctgatcgagacattccttgatcttaat
cgtactcgaatggatgaaatttcgaaggcaatggccgtttcagtggaggaactttgcaag
agagtagaagagttgacgaggttgcattga

DBGET integrated database retrieval system