Vitis vinifera (wine grape): 100256726
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Entry
100256726 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100256726 isoform X3
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100256726
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100256726
Surveillance factors
Other surveillance factors
100256726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
100256726
NCBI-ProteinID:
XP_002274725
LinkDB
All DBs
Position
14:join(25250551..25250626,25252009..25252103,25254651..25255502,25255623..25255722,25255970..25256074,25256221..25257021,25257130..25259436,25259521..25259593,25260684..25260817,25261028..25261359)
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AA seq
1624 aa
AA seq
DB search
MADGTIDFPDDLLSTKAPDEHWTDKDQATSESSIPLSPQWLYAKPVEAKILIGGTSGEMR
APNPIPHGNSTDPNQKDGWRLDGSQDKKDWRRTAADIESSRRWREEERETGLLGRRDRRK
EERRADVIPTRETAESRALTSSDRWHDNNRSSVHEPRRDNKWSSRWGPEDKEKDSRTEKR
TDVEKEDPHVDKQSFSANRTAAERDNDSRDKWRPRHRMEVHVGGSATYRSAPGFGLERGR
VEGSNVRFAPGRGKPNASGLLQIGRPLSAGSSGFVPGDKNDNVFGKSAYCYPRGKLLDIY
RKQNTVPAFDTIPVEMEQVPSITQVDSIGPLAFVAPDSDEEAVLGDIWNGKITTSGVFYS
SFREKNVGSDENLTGIGDLTLTEGKQVSLNNTEFDYESLGKTADDQAYQGDPHKEGEQDF
VSPIGVAVTDDLTPAVSNRYDFSSLRELDSTGHNELKPLQNQQWTDSAPKHLKLEHTEAA
LSSEISTQLPDDSSSLFDFSSIEKISSSNQDLLKGNNVAFSLERTIPPEELSLCYCDPQG
VTQGPFLGIDIISWFEQGFFGADLPVRLSDAPDGSPFQELGEIMPHLKNKARSASSSDLV
TKSEKSDAFGDGLGESIPDLASAKVSAVLNDQQWESSVFEDSSGVYVQPRIPKQECPVEP
QYTEDQGFQNFFALDEKVAFLGESATSSGNMRKLSANVHGSFPDLSSRPSFANEFAETGV
PMDNDDKLHPFGLLMSELRGSHMRSSQSSNLPSNIGDQSHFIDTLHERDVLLPRQSSLGA
VSDQSLVAETWSDDYRRNICSNSSVHQGAIDARHLSRMEQEFSGYDLAEHLMSQKLQKEQ
LQPQNRPSPHPTSHFIGSGVEQFPGFSFSQSKNPVLQQSVHHPAQDMEHLLELKLQQQRE
FELHQRHQFHQQQLHHHQMKLQQQQQQLQQSHIQQLLLEQLQHHHMSDPGFGQSKMDLMG
DNMLDQALLRKSLLHELQQNSFASRHLDPSLEQIIQAKIGQNAHRGRPNDLLELISQVKH
GNAFPSEQQLRFHQEQLHARQLSLALRQQMGIEGERRAGGLWPVDEADQFIRTSAGRHQA
HLAGLNPLEFYQQQQRLSSHEEQLSQLKRNLAVQEQLQRGFYEPTSVAFERPMPSGAPGM
NLDNVNARFQGLDIQDRHPYMHSIDPMGSFSSGIPSQHHQVSDWLHASHPDAIESRSRNN
GRSENSWLEPGMKQLHFEAERRKMEPEVSVASTDSSLWALAGDDEEKSKRVLMDMLHQKL
NLQSTQSSEVDHQHSISSYKSRDSFGLFPESSSSNLPPNLLPDQIVSLNNTLTEGSPNSN
SSNLRQNHLLNVYANEQFNNLENRERFPLRSNSGALGEQPLFSSTLETSQIGFVDSSSIG
NSSMGKEFSELEGKKGKKRGSKSRTEMSRSVSEIEGNLAEQAEDAMDHGELLVNAHSRHT
SVSNAGGNAGLYNHDIGLDKACQDDVSNDRLSSIVSNELDNSMLKRPPVSRVLSSDVLLE
AAPAPVVKQKNNIDDGRQNSAGNPMTNRMAETQTSAKKDMRFRRTSSCTDAAVSETSFID
MLKKPVPEADATNGAALESSDCSVQSGRSGKKKGKKGRQLDPALLGFKVSSNRILMGEIQ
RLED
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaacgattgattttccggacgatctcctctccaccaaagcgcccgatgaa
cactggaccgacaaagatcaagcaacatcagagagtagcatacctctgtccccacagtgg
ctttatgccaagccagttgaggcaaagatattgattggtggcacatcaggggaaatgcga
gcaccaaaccctataccccatggaaactccactgatcccaatcagaaagatggctggcgt
ttagatggatctcaggacaagaaagactggaggaggactgctgctgacattgaaagcagt
cgtcgctggcgtgaagaggagagagaaacaggcttacttggtagacgagatcgtagaaaa
gaagaacgtcgtgctgatgtcattcctacaagagaaactgctgagagtagagctttaact
tcttccgatcgctggcatgataataaccgtagttctgtgcatgaacctcggagagataac
aagtggtcatcaaggtggggtcctgaagataaagagaaggattctcgaactgagaagagg
acagatgtggaaaaggaagaccctcatgttgacaagcaatcttttagtgccaaccgcaca
gccgcagagcgtgacaatgattcacgtgataaatggagaccacggcatcgtatggaagtt
catgtaggtggatcagctacatatcgttctgcaccaggatttggattggagagaggacga
gtggagggttcaaatgtgcgatttgctcctggacgaggaaagccaaatgctagtggactt
ctacaaattggcaggcctctttctgctggttctagtggttttgttccgggagataagaat
gacaatgtatttgggaaatctgcgtattgttacccaaggggaaagcttctggacatttac
cgcaagcaaaatacagttcctgcttttgataccatacctgttgagatggagcaagtgccc
tcaataacacaagtagactcaattgggccattggcttttgtggcgcctgattctgatgaa
gaggctgttcttggagacatatggaatggaaaaatcactaccagtggagtattctacagc
tcatttagagagaagaatgtgggatcagatgaaaaccttacaggcattggtgacttaaca
ctgactgaagggaaacaggtttccttgaataatactgaatttgattatgaatctttggga
aagactgctgatgatcaagcatatcaaggagatccacataaagaaggtgaacaggatttt
gtgtccccaattggtgtggcagtgactgatgatttgactcctgcagtttcaaatagatat
gatttcagcagtttgagggagcttgacagtactggacataatgaactgaagcctcttcaa
aatcagcagtggacagattctgctccaaaacacttgaagttggaacacactgaggcagct
ttgtcttctgaaatcagtacccagcttcctgatgattcaagttctttatttgacttctct
tctatagagaaaatttctagtagcaaccaggaccttttaaagggcaataatgtggccttc
tcattagaaaggactatcccacctgaggagttaagtttatgttattgtgatcctcaaggg
gtaactcagggaccttttctgggaattgacatcatttcatggtttgagcaaggatttttt
ggagctgacttacctgtacgattgtcagatgctcctgatgggtctccttttcaagaactt
ggcgagatcatgccacatctgaaaaataaagctaggtctgcctccagctctgatctagtt
accaagtcagaaaaatctgatgcttttggagatggattgggagagagtattcctgacctt
gcttcagccaaggtttcagctgtcttgaatgatcagcagtgggaatcttctgtatttgag
gatagctcaggtgtttatgttcagccaagaatacctaaacaggagtgtcctgttgaaccc
cagtatactgaagatcaaggcttccaaaatttttttgcacttgatgagaaagtcgccttt
cttggagagtctgcaactagcagtggcaatatgaggaaactctctgctaatgttcatggt
tcatttcctgatttgagcagccgcccatcttttgcaaatgaatttgcagaaactggtgtg
cctatggataatgatgataagttgcatccctttggtctgttaatgtctgagctcagaggc
tcccacatgaggtctagtcagtcatcaaatttaccttcaaatataggtgatcagagtcac
tttatagataccttgcatgagagagatgtcctgttgcccagacagagttcattaggtgct
gtgtctgatcaatctcttgttgcagagacatggtctgatgattatagaagaaatatatgt
tctaactccagtgttcatcaaggtgccatagatgcccggcatttatctcgcatggagcaa
gaattcagtggctatgacttggcagagcacctgatgtcacaaaagttgcaaaaggaacaa
cttcaaccacagaaccgtccatctcctcatcccacatctcattttattggatcaggtgtg
gagcaatttcctggtttttcttttagtcagagcaagaaccctgttctccaacagtcagtc
caccatccagcacaagatatggaacatcttttggagcttaagttacaacagcagcgagag
tttgagcttcatcaacgacatcagtttcatcaacagcagcttcatcaccaccaaatgaaa
ttgcagcagcagcagcagcagctgcagcagtctcatattcaacaattgcttcttgaacag
ttgcagcatcatcacatgtctgatccgggttttgggcagtcaaagatggaccttatggga
gacaacatgcttgatcaggctttgttgaggaaaagccttctccatgaattgcagcagaat
tcgtttgcttcaaggcacctggatccatctctagaacagatcattcaagcaaagattggt
cagaatgcacatagaggacgaccaaatgatttattggagctcatatcacaggtgaagcat
gggaatgcattcccttcagaacagcagcttcgttttcaccaagaacagttgcatgcaagg
cagttatctctggcattgaggcagcagatggggattgagggagagaggcgtgctggtggg
ctctggccagttgatgaagctgatcaattcatcaggacttctgctggccgtcaccaagct
catctggcagggttgaaccctttagaattttaccagcaacagcagaggctttcctcccat
gaagaacaactaagccaacttaaacggaatcttgctgtacaggagcaactacaacgaggg
ttttatgagcctacttctgttgcatttgagaggccgatgccttctggtgctcctgggatg
aacttggataatgtaaatgctcgttttcaaggtctagacattcaagatcggcatccttat
atgcattccattgaccccatgggttctttctcttctggtatcccatctcaacaccaccaa
gtttcagactggttacatgcttctcatccagatgcaattgagtcccgctccaggaacaat
gggcggtcagaaaatagttggctagaaccagggatgaaacaattacattttgaagctgag
cgacggaagatggagcctgaagtttctgtagcttctacagattcaagtttatgggctttg
gctggagatgatgaggaaaaatcaaagagagttttgatggacatgctccaccaaaaactg
aatcttcaatctacacagtcatcagaagtggaccatcaacattctatatcatcttataaa
agtcgggattcgtttggactatttcctgagtcaagttcttcaaatcttcctcctaatctt
ctaccagatcaaatagtcagtctaaacaacacattaacagaagggtccccaaattccaat
tcaagcaacttgcggcaaaatcatttacttaatgtttatgcgaatgaacaatttaacaat
ttggaaaacagggaaagatttccccttagatctaattctggagcattaggagaacagcca
ttattttcaagcacactagagacttctcagattggttttgtggactctagctcgattggg
aattcatcaatgggcaaagaattctcagagctggagggaaagaaagggaagaagcgtggg
tccaaaagcagaacggaaatgagccggtcagtttcagagattgaaggtaacttagctgag
caagctgaagatgccatggatcatggggagctgctagtaaatgcccatagcaggcataca
tcagtgagcaatgctggtggaaatgcaggcttatacaaccatgacattggattagataaa
gcatgccaagatgatgtttctaatgataggctatcatctattgtatccaatgagcttgat
aattcaatgcttaaacgcccaccagtttctcgagtcttgtcttcagatgttctgttggag
gcggccccagctccagttgtcaagcagaaaaacaatatagatgatgggagacagaattct
gctgggaatccaatgacgaacaggatggctgaaactcagacatctgccaagaaagacatg
cggtttaggcggacctcatcttgtactgatgctgctgtatctgaaacttcattcatagac
atgctaaaaaaacctgttccagaggcagatgccaccaatggggctgctttggagtcatct
gattgtagcgtgcaatctggacgaagtggcaaaaagaaaggaaagaaaggaagacaactt
gatcctgctcttctcggattcaaagtgtccagcaaccggatcttgatgggtgagatccaa
cgtctggaagattga
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integrated database retrieval system
