KEGG   Vitis vinifera (wine grape): 100256972
Entry
100256972         CDS       T01084                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04142  Lysosome
vvi04144  Endocytosis
vvi05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100256972
   04142 Lysosome
    100256972
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    100256972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100256972
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100256972
Membrane trafficking [BR:vvi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    100256972
Exosome [BR:vvi04147]
 Exosomal proteins
  Proteins found in most exosomes
   100256972
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_Vps41
Other DBs
NCBI-GeneID: 100256972
NCBI-ProteinID: XP_002269905
UniProt: A5ACP0 A0ABY9CZQ1
LinkDB
Position
13:join(740590..740634,740900..741104,742544..742632,742746..742824,742983..743110,747687..747785,747892..748000,749069..749148,749230..749457,749541..749606,749982..750098,750645..750842,751001..751117,751283..751342,751467..751553,751793..751876,751958..752092,752196..752258,752335..752439,752522..752634,752734..752986,753124..753260,753342..753620,753709..754711,754867..755352,755475..755645,755738..755923,756452..756574,756969..757079,757386..757544)
AA seq 1704 aa
MAAANAPITMKEVLTLPSLGISPQFITFTHVTMESDKYLCVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNTRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQIVFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLVNNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVEQHRSQALEAHAASFATFKVPGNDQPCTLIGFATKSFNAGQIVS
KLHVIELGSNPGKPGFTKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ESASAVYRNRISPDPIFLTAEATSIGGFYAINRRGQVLLATVNEAAIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPMQ
SGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDTDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPIDFNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVDQCVKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPSNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDSDLWEKVLDPDNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLFE
EAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEDANVYHDLVRYLLMVRQKAKEPKVDSELIYAYAKIDRLGEI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLACTLVKLRQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSDYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLHLVKPYMVAVQSNNVSAVNEALNGIYVEEEDYDRLRESIDM
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEKGKKECFASCLFVCYDLIRPDIALELAWINNMVDFALPYLLQFIREY
AGKVDELVKDKLEALNEVKAKEKEEKDVIAQQNMYAQLLPLALPAPPMPGMGGAGMAGGF
VPPPMGSMGMPPMPPFGMPPMGTY
NT seq 5115 nt   +upstreamnt  +downstreamnt
atggctgccgcaaacgcccctatcaccatgaaggaggttctgacgttgccgagtttggga
attagtcctcagtttataacgtttacacatgtcacgatggaatctgataagtatctatgc
gttcgggagacggctccacagaacagtgttgtaatcattgatatgaatatgccaatgcag
cctttgagaaggccgatcactgcggactcggcgctaatgaatcccaataccagaattctt
gcattgaaagctcaacttccgggaaccacccaggatcacttgcaaatatttaatattgag
atgaaagccaaaatgaaatcatatcaaatgcctgagcagattgttttctggaagtggatt
accccaaagatgctgggcctggtcacgcagacctcagtatatcattggtcaatcgaaggt
gattctgaacctgtaaaaatgtttgagaggactgctaatctggtaaacaatcagataatt
aactatcgatgtgatccatctgaaaagtggttggttttgattggaattgctccgggttca
cctgagaggccacagcttgtcaaagggaatatgcagcttttctctgttgaacagcatcgt
agtcaagctcttgaagctcatgctgcatcattcgccacgtttaaagttccagggaatgat
caaccttgtacactcattggttttgccacaaagtcctttaatgctggacagattgtctca
aagctacatgtcattgaacttggatccaacccagggaaaccaggatttacaaagaaacag
gctgatcttttctttcctccagattttgctgatgattttccagttgcaatgcagatatcg
cacaaatatggcttgatatatgtgattaccaagcttggattgctgtttgtgtatgacctg
gagtcggcttctgcagtatacagaaacaggattagtccagatccaatatttttgactgct
gaagctacatctattggaggtttttatgccatcaataggcgagggcaggtgttacttgct
actgtaaatgaggcagcaattgtgcctttcgtcagtggccaattgaacaacttggagcta
gctgtcaatctcgcaaaaaggggaaatctccctggtgcagagaacttggttgtccagcgt
ttccaagaattgtttgctcagacaaagtataaggaggctgctgagcttgctgctgaatct
ccacaaggaattctccgtacaccggacacagttgccaaatttcagagtgttcctatgcaa
tctgggcagactccacctttgctacagtactttggaacacttctaactagaggaaagctc
aatgcatttgagtcattggaattatcacgcctggttgtgaatcagaacaagaagaatctt
ttggagaattggttagcagaggacaagctggagtgcagtgaggaacttggggatctagtg
aagactgtggatactgaccttgcactcaaaatatatattaaagcgagagcaactccgaaa
gttgttgcagcctttgctgagcgtcgggagtttgacaaaattctgatatactcaaagcag
gttgggtatactcctgattatttgttccttctgcaaaccattcttcgatcagatcctcag
ggagctgtaaattttgcgctaatgatgtctcaaatggagggaggttgtcccattgatttt
aatacgataactgatctctttcttcagaggaacttgatacgtgaagcaacagcatttttg
ttagatgttttgaagccaaatttacctgagcatggtttcctgcaaacaaaggtcctggaa
atcaatctggtaacttacccaaatgttgcagatgctatattagcaaatgggatgtttagc
cattatgatcgtccacggattgcccagctttgtgaaaaagctggtctttatgtgcgagcc
cttcagcattatactgagttgccagatataaaacgcgtcattgtgaatacacatgcaatt
gagccacaggcacttgtagagttctttggtacgctttcacgagaatgggctttggagtgc
atgaaggaccttcttctggtcaatctaagaggcaaccttcagataattgttcagactgcc
aaagaatattctgagcaattgggtgttgatcaatgcgtaaaactctttgagcaatttaaa
tcatacgaaggattgtacttttttctgggttcttatttgagctcaagtgaggatcctgac
attcacttcaagtatattgaagctgctgctaaaactggacaaattaaggaggttgagcgt
gtgactcgagaatcaaacttctatgatgctgaaaaaacaaagaacttcctaatggaagcc
aagcttccagatgcacggccgctgattaatgtgtgtgaccgttttggttttgtcccagat
ctcacacattacctatacacgaacaacatgcttcgatatattgaaggttatgttcaaaag
gtgaaccctagtaatgcacctttagttgtggggcagctgctagatgatgaatgtccagaa
gatttcattaaaggtctaattctttctgtccggtcgctgcttcctgttgagccccttgtg
gatgaatgtgagaagagaaatcgactccgtttactcactcagttcttggagcatcttgtg
agtgagggaagccaagatgtgcatgtccataatgctctgggtaaaatcattatagacagc
aacaataatccagagcacttcctcactaccaacccatactatgattctcgtgttgtgggt
aaatattgtgaaaagcgtgatcccaccctcgcagttgttgcttaccggagaggacaatgt
gacgaagaacttataaatgtcacaaataagaactctttgttcaaactgcaagccagatat
gtagttgaaaggatggattctgatctctgggagaaagttcttgaccctgataatgattat
agaagacagctcattgatcaagtagtatctactgctttgccagaaagcaagagtccagaa
caagtttctgcggctgttaaggctttcatgacagctgatctaccccacgagctaattgag
cttcttgaaaagattgtgcttcaaaactctgcattcagtgggaactttaatctgcagaac
cttcttatcttgacagccattaaagcagatccatctagagtgatggattacattaacagg
ctggataactttgatggtcctgccgttggtgaagttgcagtggaagcccaactgtttgaa
gaagcatttgcaattttcaagaagttcaacttgaatgtccaagctgtcaatgtgttactg
gataatatccaaagcattgagcgtgctgtggagtttgcattccgtgttgaagaagatgct
gtttggagccaggtggccaaggctcaactaagggaggggttggttagtgatgcaattgag
tcatttattcgtgcagatgatgccacccagttcctagatgttattcgtgctgctgaagat
gcaaatgtttaccatgacttagtgaggtaccttttgatggttagacagaaggcaaaagag
cccaaagtggacagtgagctcatttatgcttatgcgaagattgatcggctgggtgaaatt
gaagaattcattctcatgccaaatgttgctaatctccaaaatgttggtgatcggttgtat
gatgaagccctatacgaggctgcaaaaataatatttgcttttatttctaattgggccaag
ttggcctgcacacttgtgaagttgagacagttccaaggtgctgttgatgcagcacggaag
gctaacagctcaaagacatggaaggaggtttgctttgcttgtgttgatgcagaagagttc
cgcttagctcagatatgtggtctcaacattattatacaggtcgatgatttggaggaggtc
agtgattattaccagaatagaggatgcttcaatgagctaatatcactcatggagagtggt
ctgggcttggagcgtgcacatatgggcatttttactgagttgggtgtcctgtatgctcga
tatcgtcctgagaagcttatggaacacatcaaactgttttcaacccgtctcaacattccc
aagcttatacgggcttgtgatgaacagcagcactggaaggaactcacttacttgtatatc
caatatgatgagtttgacaatgctgcaaccactataatgaaccattctcctgatgcatgg
gaccacatgcagtttaaagatgttgcagtcaaagttgctaatgtggagctctattacaag
gccgtgcacttttacttgcaagagcatcctgatctcattaatgatcttctaaatgtgctt
gcacttcgagtagaccatactcgtgtggttgacataatgcggaaggcaggtcaccttcat
cttgtgaagccatatatggttgcagttcagagtaacaatgtttctgctgtgaatgaggct
ttgaatgggatttatgttgaggaggaagactatgacagactgcgtgaatcaattgatatg
catgataactttgatcagattggccttgcacagaagattgagaaacacgagcttcttgag
atgagacgtgttgctgcttatatttacaagaaagcaggcagatggaagcaatcaattgca
ttgtcgaagaaagacaacctgtacaaagacgcgatggagactgcctcgcaatctggtgac
cgtgaacttgcagaggagttgcttgtttatttcattgagaagggaaagaaagaatgcttt
gcatcttgcctctttgtgtgctacgacttaattcgtccagacattgctcttgaacttgcc
tggattaacaatatggttgactttgccttgccatatctgttgcagtttatccgcgagtac
gcaggcaaagttgatgaacttgttaaggacaagctggaagctcttaatgaagttaaggct
aaagagaaggaagagaaggatgtaatcgcccagcagaatatgtatgctcagttgctgccc
cttgctttgcctgcacctccgatgcccggcatgggaggagctgggatggcaggaggtttt
gttccacctcccatgggtagtatgggaatgcctccaatgcctccttttggaatgccgcca
atgggcacttattaa

DBGET integrated database retrieval system