Vitis vinifera (wine grape): 100256994
Help
Entry
100256994 CDS
T01084
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100256994
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvi01009
]
100256994
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100256994
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100256994
03041 Spliceosome [BR:
vvi03041
]
100256994
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100256994
Protein phosphatases and associated proteins [BR:
vvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100256994
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100256994
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100256994
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100256994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
FAS1_DH_region
Motif
Other DBs
NCBI-GeneID:
100256994
NCBI-ProteinID:
XP_002277816
UniProt:
D7TV73
LinkDB
All DBs
Position
2:complement(join(395189..395200,395839..396048,397258..397817,401512..401689))
Genome browser
AA seq
319 aa
AA seq
DB search
MDGELLDDIIRRLVDAKNGRTPRQVQLTEAEIRMLCVTSKEIFLSQPNLLELEAPIKICG
DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKIICMHGGLSPELKNL
DQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVTEFLQKHDLDL
ICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMIVDDTLTCSFQILKSTDKKG
KLGFGNMLRPGTPPHKGKG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacggagaattgttggacgacatcataaggcggcttgttgatgcgaagaacgggcgg
acgccgaggcaggtgcagttgacggaagcggaaatccggatgctttgcgtgacgtcgaag
gagatcttcctaagccagccgaatcttcttgagcttgaagcgccgataaagatttgtgga
gatgttcatggtcagttttctgatcttctaagattgtttgagtacggtgggtacccacca
gaagcaaactatttattcctaggagactatgttgatcgtggtaaacagagcatagagacg
atatgccttctccttgcatacaagatcaagtacaaggaaaacttcttcctcctcaggggc
aaccatgaatgtgcttccatcaaccgaatttatgggttctatgatgaatgtaagaggagg
tttaacgttcgcctctggaagacatttactgactgcttcaactgccttcctgtagccgct
cttatcgatgagaagatcatttgcatgcatggaggtttatctcctgaattaaaaaacttg
gatcagatcagaaatattgctcgccctgttgatgtaccagatcaggggcttctctgtgat
ctcctgtgggcagatcctgataaagatattgaaggttggggagagaatgacaggggtgtg
tcttacacatttggggctgacaaggttactgaattccttcagaaacatgaccttgatctc
atttgccgagctcatcaggttgtggaagatgggtatgagttttttgcaaagaggcagcta
gtgaccatattctcggcaccaaattactgtggcgagttcgacaatgctggtgccatgatg
attgtggatgatacattaacatgttcctttcagatccttaaatcaactgataagaaggga
aaactaggctttggaaacatgttgagaccaggaacgcctcctcacaagggtaagggttga
DBGET
integrated database retrieval system
