Vitis vinifera (wine grape): 100257028
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Entry
100257028 CDS
T01084
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00531
Glycosaminoglycan degradation
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
100257028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vvi00536
]
100257028
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
100257028
Glycosaminoglycan binding proteins [BR:
vvi00536
]
Heparan sulfate / Heparin
Enzymes
100257028
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
100257028
NCBI-ProteinID:
XP_002284470
UniProt:
F6GT30
A0ABY9DNB6
LinkDB
All DBs
Position
17:complement(join(7930848..7931237,7931479..7931578,7931701..7931826,7931980..7932169,7933760..7933993,7934083..7934231,7934949..7935132,7935316..7935352,7935475..7935684))
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AA seq
539 aa
AA seq
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MGFRFFLFLFLATLPAFLAQEFEDAIIKVDGATTVAETDANFICATLDWWPHDKCNYNHC
PWGYSSVINMDLSHPLFAKAIEAFKHLRIRIGGSLQDQVLYDIGSLRSPCHPFRKMNDGL
FGFSKGCLRMSRWDELNRLFSQTGVILTFGLNALYGRYQIRKGAWAGVWDSSNTQNFIKY
TISKGYQIDSWEFGNELSGSGVGASVNAEQYGKDLINLKAIINKLYNNSNVKPLLVAPGG
FYEQDWYAKLLQVSGSSTVNVVTHHIYNLGAGVDPNLVSKILNPHYLSRVEETFKSLDKT
LQTWGPWASAWVGESGGAYNSGGHLVSNTFVNSFWYLDQLGMASKYHTKVYCRQTLIGGN
YGLLNTTTLVPNPDYYSALLWHRLMGKGVLAVDSTASPFLRSYAHCSKGKAGITLLLINL
SNQTTFQINVENSMNLNLFVKKTTMYRGSAFMRGLKKSASWIGSKADEQLFREEYHLTPK
DGYLRSQTMVLNGMPLELTDDGNIPSLNPVRLNLNAPIFINPLSIAFIAFPNFDAPACA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggattccgcttcttcttatttctttttcttgctaccctccctgcgttcttggctcaa
gaatttgaagatgcaataattaaagttgatggggctacaacagttgctgaaactgatgct
aacttcatctgtgctactctggattggtggcctcatgataagtgtaactacaaccactgt
ccatggggatattcatctgtaataaatatggacttgtctcatcctctttttgccaaggca
attgaagcttttaagcatttgagaataagaattggaggttctttgcaagaccaagtatta
tatgatatcggatctttgaggtccccttgccatccttttagaaagatgaatgatggatta
tttggattttcgaagggatgtttacgcatgagtaggtgggatgagctaaaccgcttgttc
agtcagacaggagtaattctgacatttgggttgaatgcactctatgggaggtaccagatt
agaaaaggcgcatgggccggagtttgggactcaagtaacactcagaacttcataaagtac
actatttccaagggataccagattgattcatgggaatttggtaacgagttgagtggaagt
ggagttggtgcaagcgttaatgctgaacagtatgggaaggacttaatcaaccttaaagct
atcatcaataagctgtataataactcgaatgtcaaaccattacttgtagcaccaggagga
ttctatgaacaggattggtatgctaagcttcttcaggtttcgggttcaagcacagtcaat
gttgtgacacatcatatctataatctgggtgcaggtgtagatcccaatcttgtgagtaag
atactgaatccccattacttgagcagggtagaagaaacattcaagagccttgacaaaacc
cttcaaacctggggcccttgggcttctgcttgggttggagaatctggtggggcttataac
agtggtggtcatctggtgtctaacacctttgtaaacagcttttggtacttagatcagctt
ggaatggcatccaagtaccacactaaagtttattgcaggcagactttgattggtggaaac
tatggtctcctcaacacaaccactttagttcccaaccctgattattacagcgcccttctg
tggcatcgactcatgggaaaaggtgtacttgctgttgatagtactgcctcaccattttta
cgctcttatgcccattgttcaaaagggaaggcaggcataactttactcctgatcaattta
agcaaccagaccacattccaaatcaatgttgagaacagcatgaacctcaacttgtttgtg
aagaagacaaccatgtacagaggaagtgctttcatgcgtggtctcaagaaatcagcgtca
tggatcggaagtaaggcagatgaacaattattcagagaagagtatcatctaactccaaaa
gatgggtacctcagaagccagaccatggttctaaatgggatgcccttggagcttactgat
gatggaaacatcccaagtttgaacccagtacgccttaatctgaatgcaccgatattcatc
aatccattgtccattgcattcattgcattccccaactttgatgccccagcttgtgcgtga
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