KEGG   Vitis vinifera (wine grape): 100257033
Entry
100257033         CDS       T01084                                 
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
  KO
K03255  protein TIF31
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:vvi03012]
    100257033
Translation factors [BR:vvi03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    100257033
SSDB
Motif
Pfam: TPR_12 TPR_10 eIF3_p135 TPR_NPHP3 TPR_2 CLU_N TPR_9 CLU TPR_MalT TPR_8 PAM2
Other DBs
NCBI-GeneID: 100257033
NCBI-ProteinID: XP_059596765
LinkDB
Position
11:join(9600705..9600774,9601031..9601092,9601217..9601309,9602608..9602680,9602766..9603134,9604234..9604298,9604435..9604566,9604770..9604811,9604884..9605408,9605524..9605681,9605902..9606409,9606620..9606682,9606764..9606865,9607493..9607813,9607907..9607999,9608092..9608193,9608288..9608392,9612245..9612378,9616571..9616754,9617883..9618014,9618099..9618211,9618730..9618811,9618920..9621085)
AA seq 1897 aa
MAPKTGKTKPHKTKGEKKKKEEKVLPTVIEITVETPDDSQVTLKGISTDRILDVRKLLAV
HVETCHLINYSLSHEVRGGGLKDSVDIPSLKPCHLTIVQEDYTEDLAVAHVRRLLDIVAC
TSSFGSPSSSPKKPGSKEPASSQAEGQPSDNGVEPTSKPRPGDKKLGGAQGGAHAHGGVK
ASKEAKPEESEKGDIAVSMCPPPRLGQFYDFFSFSHLTPPIQYIRRSTRPFLEDKTEDDL
FQIDVRVCSGKPMTIVASRKGFYPAGKRLLLSHSLVSLLQQISRVFDSAYKALMKAFTEH
NKFGNLPYGFRANTWVVPPVIADNPSHFPPLPIEDENWGGNGGGQGRDGKHDHRQWAKEF
SILAAMPCKTAEERQIRDRKAFLLHSLFVDVSVFKAVAAIKHLMESNKCSPNGPNGTVFH
EERIGDLIIRVTRDVPDASLKLDGKNDGGQVLGMSKEELSQRNLLKGITADESATVHDTS
TLGVVIVRHCGYTAVVKVPAKVNWEGNPIPQDIDIEDQPEGGANALNVNSLRMLLHKSST
PQASVQRLQSGDFEDSHSARCLVRNVLEESLMKLQGEATKHARSIRWELGACWVQHLQNQ
ASGKTESKKTEETKVEPAVKGLGKQGGLLKEIKKKIDDRSGKAEQGKDATLTNSLDMNKK
LDASHLEKQDEEKEMMWRKLLPEAAYLRLKESETGLHLKSPEELIEMAHKYYADTALPKL
VADFGSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQSLCIHEMVVRAYKHI
LQAVVAAVDNIADLAGSIASCLNILLGTPSTENSDANISDDDNLKWKWVETFLLKRFGWQ
WKYENCQDLRKFSILRGLCHKVGLELVPRDYDMDIASPFRKSDIISMVPVYKHVACSSAD
GRTLLESSKTSLDKGKLEDAVNYGTKALSKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFN
QATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCG
PSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALS
LMEAYSLSVQHEQTTLQILQAKLGPDDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDA
SISSKGHLSVSDLLDYITPDAEMKARDAQKKQARAKIKGKLGQNWEGMDEDQKDEILSQS
YPITENSSDKENKSEAPFAETRDEKPEFSLAETAVINQSDDLAQDDTSDEGWQEAVPKGR
SPAGRKASGSRRPSLAKLNTNSMNASQSPRYRGKPTGFASPRTSPNESSTPTGSVLPVPK
KFVKSSSFSPKQNTPTTSGTGPEKLSNPKSAPASPAASDQVSKPAPLASPISVQAAGKLF
SYKEVALAPPGTIVKVVKEQLPKENVSAEQNPRMGKEAKETPVMETAQGKEEKTAKDVEG
EKVKKHVGEKKLLVSKQEMKGVANEEKQVAHSVLTASPEQVESDATEEKKLEAKKVEVKG
VSVAKAEAGNVAVTGLKNSDSSNDLNTTDSKSDILQKGLLDNSHVASPDSEPQSVLTDNT
TLLLENDASLPKEKVAGGDDNSHDLPNDDGSSRPSSTEGEKQEEADTGKETKKLSAAAPP
FNPSTIPVFGSVSVPGFKEHGGILPPPVNIPPMLTVNPVRRSPHQSATARVPYGPRLSGG
YNRSGNRVPRNKTGYHNPEHNGDASPFTSPRVMNPHAAEFVPGQPWVPNGYPMSPNGYLA
SPNGIPLSPNGFPISPNGIPLSPNGFPPSPNGVPVIQNEFPASPVSSVDSPTVDTVETGA
ESKSEVSEEGDAQKASTEVGDMTNQPREHSVQEEDQSGDNEQIGQEIEEKPVETVAASDN
VDAAKENCDNREVVKEKPSKCWGDYSDSEAEIVEVTS
NT seq 5694 nt   +upstreamnt  +downstreamnt
atggctcccaagactgggaagacgaagcctcacaaaaccaaaggagagaagaagaaaaag
gaagagaaagttctacccactgtcattgaaataaccgtggaaacgcccgacgactcacaa
gtaacactcaagggaatatcgacggacaggatcctggatgtgagaaagcttttagctgtc
catgtcgagacatgtcacttgatcaactactcgttatctcatgaggtgagaggaggcgga
ctcaaagactcagtggacataccttctctgaaaccttgccacctcaccatcgtccaagag
gactacacggaggacctcgccgttgcacacgtccgacgactgctcgacatcgtcgcctgc
actagctccttcggttccccatcttcttcccctaaaaagcccggttcaaaagaacccgct
tccagccaagcggaaggccaaccctctgacaatggggtcgaacccacttccaagcccagg
ccaggtgacaagaagctcggcggagcccagggaggcgcccatgcccacggtggtgtcaag
gctagcaaagaggccaaaccggaggagtcagagaaaggggacatcgcggtctccatgtgc
cccccgcccaggctcggacagttctatgatttcttctccttttcgcacctcacacctccg
attcaatacattaggagatccactcggcctttccttgaggataaaacagaagatgacttg
tttcaaattgatgttcgggtttgcagtgggaaaccaatgacaatagttgcttcccgaaaa
ggtttctaccctgctggaaaacgtcttcttctgagtcactctttggttagtctgttgcag
cagataagtcgggtgtttgattctgcatacaaagctcttatgaaagcttttacagagcac
aataagtttggaaaccttccttatggttttcgtgcaaacacatgggttgtgccaccagtt
attgctgataatccatctcattttcccccactacccattgaagatgaaaattggggtgga
aatggtggtggacaaggaagagatggtaaacatgatcacaggcaatgggctaaagagttc
tcaattctagcagcaatgccctgtaaaacagcagaagaaaggcaaattcgagatcgaaaa
gcctttctgcttcatagtctatttgtcgacgtttcagtttttaaagctgttgcagcaatc
aagcatcttatggagagcaataaatgctccccaaatggtcccaatggtacagttttccat
gaggaaaggattggagatttaattattagggtaacaagagatgtgcctgatgcaagcttg
aagttggatggtaaaaatgatgggggtcaggttcttgggatgtcaaaagaggagctttct
cagagaaatttacttaaaggaataactgctgatgaaagtgcaactgttcatgatacttcc
actttaggtgttgttattgtgagacactgtggctacactgctgttgtgaaagttccagct
aaggtcaattgggaggggaatcctattccccaggacattgacattgaggatcagcctgaa
ggaggtgccaatgccttgaatgtcaatagcttgagaatgctattgcacaagtcatccaca
cctcaagcatcagttcaacggttacaaagtggagattttgaagattcacattctgctagg
tgtttggtacggaatgttctcgaggaaagcctaatgaaattgcagggagaagcaactaaa
catgcaagatcaatcagatgggagctaggagcctgttgggtgcaacacttacaaaaccag
gcttcagggaaaaccgagtctaagaaaactgaagaaaccaaggttgagccagctgtaaag
ggtctaggaaagcaaggtggactgcttaaggaaattaagaagaaaatagacgacaggagc
ggcaaagctgagcagggcaaggatgctactttgactaacagccttgacatgaacaagaaa
ttagatgctagtcacttagagaaacaagatgaggaaaaagaaatgatgtggagaaagctt
cttcctgaagcagcatatttgcgccttaaggaatctgaaactggacttcaccttaagtca
cctgaagagttgattgagatggcacacaaatactatgctgatactgcacttccaaaactg
gtggcagattttggctcccttgaactttcacctgtcgatggaaggactttgacagatttt
atgcacaccaggggtttgcaaatgtgttcgttgggtcgtgtggttgagcttgcagacaaa
ctgcctcatgtgcaatcactctgtatacatgagatggtagtgcgagcctacaaacacata
ttgcaagctgttgtagcagcagttgataacattgctgacttggcagggtcaatagcatca
tgcttaaatatattgctaggaacaccatcaactgaaaattctgatgccaacattagtgat
gatgataacttgaaatggaagtgggtggaaactttccttttgaagaggtttggttggcaa
tggaagtatgaaaattgccaggatcttagaaaattttccattcttcgtgggctctgccac
aaggttggacttgagcttgttcctagggactatgatatggatattgcatctccttttagg
aagtcagatattataagcatggtccctgtctataagcatgttgcatgttcatctgcggat
ggtcgtacactgttggaatcatcgaagacttctttggataaagggaaattggaagatgct
gttaactatggcactaaggcactctcaaaacttgtggcagtctgtggtccttatcatcga
atgacagctggagcatatagtcttttggctgtagtgctctaccatactggggattttaat
caggcaaccatctatcagcaaaaagctttggatatcaatgagagagagcttggacttgat
catcctgatacaatgaaaagttatggggatcttgctgttttctattatcggcttcagcat
acagagttagcattgaagtatgtcaatcgtgcattatatcttttgcatcttacatgcggg
ccttcacatccaaacactgctgccacatatattaatgtagcaatgatggaagaaggtttg
gggaatgtccatgttgcactgcgatacctccatgaggctctcaagtgcaaccaaagacta
cttggagctgatcacatacagactgctgccagctatcatgctatagcaattgcactgtct
ttgatggaagcatactccttaagtgttcagcatgaacaaacaactctacagatactgcag
gccaagcttggaccagatgatttgcgtacacaggatgcggcagcatggcttgagtacttc
gagtccaaggctctggagcagcaagaagctgcccgcaatggcactccaaagccagatgcc
tctatctccagcaaaggtcatctaagtgtatcggaccttttggattatataaccccagat
gcagagatgaaagcaagagatgcccaaaagaagcaagctcgtgcaaagattaaaggaaaa
ctgggccaaaactgggaaggtatggatgaagatcagaaggacgagattttatcacaaagt
taccctattacagagaattctagtgataaagaaaacaagtctgaagctccatttgcagaa
acaagggatgagaaacctgaatttagtctagcagaaacagcagtaataaaccaaagtgat
gacctggcgcaagatgacacctctgatgaaggatggcaagaagctgttccgaaaggtcga
tcaccggcaggtcgcaaggcttctggttcaaggaggccaagcctagcaaaattgaatact
aactctatgaatgcgtcccagtcaccaagataccgtggaaaacccacaggttttgcatcc
ccaagaacaagtcctaatgagtcctctacccccactggatctgttcttcctgttcctaag
aaatttgtgaagagttcaagcttcagcccgaaacaaaacactcctacaacctcgggtact
gggccagagaaattatctaatccaaagtcagccccggctagcccagcggcaagtgatcaa
gtttcaaaacctgcccccttggcaagtccaatcagtgttcaggcagctggaaaacttttc
tcctacaaagaagttgctttggctccacctgggacaattgtgaaggttgtgaaagaacag
ttgccaaaggaaaatgtttctgctgaacaaaatcctcggatgggaaaggaggcaaaggag
acacctgtgatggaaacagctcaaggtaaggaggagaaaactgcaaaagatgtggaggga
gaaaaagttaagaaacatgtaggagagaaaaagcttctggtttctaaacaggaaatgaaa
ggagttgccaatgaagaaaaacaagtggcccattccgttttgacggcatcaccagagcaa
gtggagagtgatgccactgaagaaaaaaagctggaggctaaaaaagtagaagtaaaagga
gtctctgttgccaaagcagaagctggaaatgttgcagttactggattaaagaattctgat
tcttccaatgatttaaacacaactgattccaagagtgacatattgcaaaaaggattattg
gataattcccatgtggcttcccctgattcagaaccacaatctgttttaactgacaataca
actctgttgctggaaaatgatgcctccctcccgaaggaaaaagtggcagggggagatgac
aattcacatgatctacctaatgatgatgggagttccaggccttcgtcaactgaaggagaa
aaacaagaggaagcagataccggaaaagaaactaagaaactttctgcagctgctcctcca
ttcaatccatcaactattccagtttttggttcagtttcagttcctggttttaaagagcat
ggaggaattttacccccaccagtaaatatcccaccaatgcttacggttaatcctgttcga
agatcaccccatcagtctgcaacagcaagggttccctatggtccacgactgtcaggtggt
tataacagatctggaaatcgggttccacgtaacaaaactggttaccacaatcctgaacat
aatggagatgcgagtcccttcacctccccaagggtaatgaacccacatgcagccgaattt
gtacctggccaaccttgggttcccaatggctatccaatgtctccaaatggttatttggct
tccccaaatggtatcccactgtctcctaatggttttcccatctccccaaatggtatccca
ctgtctccaaatggttttccaccatccccgaacggtgttccggtgattcaaaatgagttt
ccagcatctccagtcagttcagttgattctcctacagttgatactgttgaaactggcgct
gaaagtaaaagtgaagtttcagaagagggggacgcccagaaggcctcaacagaagtggga
gacatgacaaatcagccaagggaacacagtgtacaagaggaagatcagtctggggacaat
gaacaaattgggcaagaaattgaagaaaagcctgtagagacagttgcagcatctgataat
gttgatgctgcaaaagaaaattgtgacaacagagaggtggtgaaggaaaagccaagcaag
tgttggggagactacagtgatagcgaagctgaaattgttgaggttacaagctga

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